IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
498	 44.28	0	612325..613329	+	334	157960328	-	Spea_0499	-	hypothetical protein
499	 47.27	0	614099..614428	+	109	157960329	-	Spea_0500	-	ferredoxin
500	 42.17	0	614605..615147	+	180	157960330	-	Spea_0501	-	RNA polymerase sigma factor SigZ
501	 41.46	-1	615214..615927	+	237	157960331	-	Spea_0502	-	glutathione S-transferase domain-containing protein
502	 44.95	0	616645..618675	+	676	157960332	-	Spea_0503	-	cytochrome c, putative
503	 45.75	0	618715..619173	+	152	157960333	-	Spea_0504	-	rhodanese domain-containing protein
504	 44.66	0	619233..620018	+	261	157960334	-	Spea_0505	-	peptidylprolyl isomerase FKBP-type
505	 41.04	-1	620104..620817	+	237	157960335	-	Spea_0506	-	TPR repeat-containing protein
506	 46.13	0	620880..621590	+	236	157960336	-	Spea_0507	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
507	 44.62	0	621593..622540	+	315	157960337	-	Spea_0508	-	polysulphide reductase NrfD
508	 49.28	+1	622713..623201	+	162	157960338	-	Spea_0509	-