IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
491	 48.04	0	603830..604135	+	101	157960321	-	Spea_0492	-	hypothetical protein
492	 35.00	-2	604262..604921	-	219	157960322	-	Spea_0493	-	lysine exporter protein LysE/YggA
493	 44.93	0	605426..605563	+	45	157960323	-	Spea_0494	-	hypothetical protein
494	 40.35	-1	605743..605913	+	56	157960324	-	Spea_0495	-	hypothetical protein
495	 38.71	-1	606457..607014	+	185	157960325	-	Spea_0496	-	hypothetical protein
496	 41.87	-1	607120..608490	+	456	157960326	-	Spea_0497	-	FNIP
497	 48.87	+1	608893..611712	+	939	157960327	-	Spea_0498	-	hypothetical protein
498	 44.28	0	612325..613329	+	334	157960328	-	Spea_0499	-	hypothetical protein
499	 47.27	0	614099..614428	+	109	157960329	-	Spea_0500	-	ferredoxin
500	 42.17	0	614605..615147	+	180	157960330	-	Spea_0501	-	RNA polymerase sigma factor SigZ
501	 41.46	-1	615214..615927	+	237	157960331	-	Spea_0502	-	glutathione S-transferase domain-containing protein
502	 44.95	0	616645..618675	+	676