IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
482	 47.74	0	594264..594971	+	235	157960312	-	Spea_0483	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
483	 45.89	0	594974..595921	+	315	157960313	-	Spea_0484	-	polysulphide reductase NrfD
484	 48.67	+1	596272..596760	+	162	157960314	-	Spea_0485	-	NosL family protein
485	 49.22	+1	596830..598170	+	446	157960315	-	Spea_0486	-	periplasmic copper-binding
486	 49.39	+1	598170..599147	+	325	157960316	-	Spea_0487	-	ABC transporter related
487	 45.63	0	599149..599994	+	281	157960317	-	Spea_0488	-	copper ABC transporter, permease protein
488	 43.61	0	600202..601485	+	427	157960318	-	Spea_0489	-	transcriptional regulator, CadC
489	 37.25	-2	602626..603084	-	152	157960319	-	Spea_0490	-	hypothetical protein
490	 36.99	-2	603137..603382	-	81	157960320	-	Spea_0491	-	hypothetical protein
491	 48.04	0	603830..604135	+	101	157960321	-	Spea_0492	-	hypothetical protein
492	 35.00	-2	604262..604921	-	219	157960322	-	Spea_0493	-	lysine exporter protein LysE/Yg