IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
473	 43.52	0	584044..584259	-	71	157960303	-	Spea_0474	-	hypothetical protein
474	 48.04	0	584666..586195	+	509	157960304	-	Spea_0475	-	Na+/H+ antiporter NhaC
475	 47.57	0	586492..587025	-	177	157960305	-	Spea_0476	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
476	 46.98	0	587069..587515	-	148	157960306	-	Spea_0477	-	cytochrome C biogenesis protein
477	 47.76	0	587512..589494	-	660	157960307	-	Spea_0478	-	cytochrome c-type biogenesis protein CcmF
478	 45.66	0	590051..592087	+	678	157960308	-	Spea_0479	-	cytochrome c, putative
479	 43.36	0	592148..592576	+	142	157960309	-	Spea_0480	-	rhodanese domain-containing protein
480	 46.39	0	592614..593417	+	267	157960310	-	Spea_0481	-	peptidylprolyl isomerase FKBP-type
481	 40.38	-1	593449..594186	+	245	157960311	-	Spea_0482	-	hypothetical protein
482	 47.74	0	594264..594971	+	235	157960312	-	Spea_0483	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
483	 45.89	0	594974..595921	+	315