version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 471 42.28 0 582132..583238 + 368 157960301 - Spea_0472 - hypothetical protein 472 48.01 0 583314..583892 - 192 157960302 - Spea_0473 - hypothetical protein 473 43.52 0 584044..584259 - 71 157960303 - Spea_0474 - hypothetical protein 474 48.04 0 584666..586195 + 509 157960304 - Spea_0475 - Na+/H+ antiporter NhaC 475 47.57 0 586492..587025 - 177 157960305 - Spea_0476 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 476 46.98 0 587069..587515 - 148 157960306 - Spea_0477 - cytochrome C biogenesis protein 477 47.76 0 587512..589494 - 660 157960307 - Spea_0478 - cytochrome c-type biogenesis protein CcmF 478 45.66 0 590051..592087 + 678 157960308 - Spea_0479 - cytochrome c, putative 479 43.36 0 592148..592576 + 142 157960309 - Spea_0480 - rhodanese domain-containing protein 480 46.39 0 592614..593417 + 267 157960310 - Spea_0481 - peptidylprolyl isomerase FKBP-type 481 40.38 -1 593449..594186 + 245 157960311 - Spea_0482 - hypothetical protein 482 47.74 0 594264..594971 + 235 157960312 - Spea_0483 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 483 45.89 0 594974..595921 + 315 157960313 - Spea_0484 - polysulphide reductase NrfD 484 48.67 +1 596272..596760 + 162 157960314 - Spea_0485 - NosL family protein 485 49.22 +1 596830..598170 + 446 157960315 - Spea_0486 - periplasmic copper-binding 486 49.39 +1 598170..599147 + 325 157960316 - Spea_0487 - ABC transporter related 487 45.63 0 599149..599994 + 281 157960317 - Spea_0488 - copper ABC transporter, permease protein 488 43.61 0 600202..601485 + 427 157960318 - Spea_0489 - transcriptional regulator, CadC 489 37.25 -2 602626..603084 - 152 157960319 - Spea_0490 - hypothetical protein 490 36.99 -2 603137..603382 - 81 157960320 - Spea_0491 - hypothetical protein 491 48.04 0 603830..604135 + 101 157960321 - Spea_0492 - hypothetical protein 492 35.00 -2 604262..604921 - 219 157960322 - Spea_0493 - lysine exporter protein LysE/YggA 493 44.93 0 605426..605563 + 45 157960323 - Spea_0494 - hypothetical protein 494 40.35 -1 605743..605913 + 56 157960324 - Spea_0495 - hypothetical protein 495 38.71 -1 606457..607014 + 185 157960325 - Spea_0496 - hypothetical protein 496 41.87 -1 607120..608490 + 456 157960326 - Spea_0497 - FNIP 497 48.87 +1 608893..611712 + 939 157960327 - Spea_0498 - hypothetical protein 498 44.28 0 612325..613329 + 334 157960328 - Spea_0499 - hypothetical protein 499 47.27 0 614099..614428 + 109 157960329 - Spea_0500 - ferredoxin 500 42.17 0 614605..615147 + 180 157960330 - Spea_0501 - RNA polymerase sigma factor SigZ 501 41.46 -1 615214..615927 + 237 157960331 - Spea_0502 - glutathione S-transferase domain-containing protein 502 44.95 0 616645..618675 + 676 157960332 - Spea_0503 - cytochrome c, putative 503 45.75 0 618715..619173 + 152 157960333 - Spea_0504 - rhodanese domain-containing protein 504 44.66 0 619233..620018 + 261 157960334 - Spea_0505 - peptidylprolyl isomerase FKBP-type 505 41.04 -1 620104..620817 + 237 157960335 - Spea_0506 - TPR repeat-containing protein 506 46.13 0 620880..621590 + 236 157960336 - Spea_0507 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 507 44.62 0 621593..622540 + 315 157960337 - Spea_0508 - polysulphide reductase NrfD 508 49.28 +1 622713..623201 + 162 157960338 - Spea_0509 - NosL family protein 509 46.59 0 623257..624576 + 439 157960339 - Spea_0510 - periplasmic copper-binding 510 47.63 0 624672..625580 + 302 157960340 - Spea_0511 - ABC transporter related 511 42.30 0 625582..626406 + 274 157960341 - Spea_0512 - ABC-2 type transporter 512 43.15 0 626672..627955 + 427 157960342 - Spea_0513 - transcriptional regulator, CadC 513 48.57 +1 628444..628863 + 139 157960343 - Spea_0514 - D-ribose pyranase 514 49.60 +1 628882..630387 + 501 157960344 - Spea_0515 - D-ribose transporter ATP binding protein 515 50.15 +1 630384..631358 + 324 157960345 - Spea_0516 - ribose ABC transporter permease protein 516 49.67 +1 631445..632344 + 299 157960346 - Spea_0517 - D-ribose transporter subunit RbsB 517 48.05 0 632466..633389 + 307 157960347 - Spea_0518 - ribokinase 518 50.85 +1 633517..634521 + 334 157960348 - Spea_0519 - LacI family transcription regulator 519 45.99 0 634615..635325 - 236 157960349 - Spea_0520 - FMN reductase 520 49.66 +1 635435..636916 - 493 157960350 - Spea_0521 - UbiD family decarboxylase 521 48.25 0 637137..637706 + 189 157960351 - Spea_0522 - hypothetical protein 522 42.13 0 637794..638384 + 196 157960352 - Spea_0523 - hypothetical protein 523 42.86 0 638457..638981 - 174 157960353 - Spea_0524 - GCN5-related N-acetyltransferase 524 44.50 0 639013..639576 - 187 157960354 - Spea_0525 - redoxin domain-containing protein 525 47.05 0 640018..641220 + 400 157960355 - Spea_0526 - aromatic amino acid transporter 526 48.81 +1 643519..644862 + 447 157960356 - Spea_0527 - glutamate dehydrogenase 527 40.64 -1 651937..653757 + 606 157960357 - Spea_0528 - hypothetical protein 528 46.12 0 653848..655044 - 398 157960358 - Spea_0529 - putative plasmid transfer protein 529 44.34 0 655536..656162 + 208 157960359 - Spea_0530 - hypothetical protein 530 42.66 0 656197..656550 - 117 157960360 - Spea_0531 - hypothetical protein 531 50.38 +1 656680..657342 - 220 157960361 - Spea_0532 - short-chain dehydrogenase/reductase SDR 532 49.23 +1 657397..657849 - 150 157960362 - Spea_0533 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 533 48.99 +1 657864..658310 - 148 157960363 - Spea_0534 - 3-dehydroquinate dehydratase, type II 534 48.94 +1 658483..658905 - 140 157960364 - Spea_0535 - hypothetical protein 535 49.73 +1 659098..659469 + 123 157960365 - Spea_0536 - hypothetical protein 536 46.33 0 659541..659717 + 58 157960366 - Spea_0537 - hypothetical protein 537 47.26 0 659872..660309 + 145 157960367 - Spea_0538 - hypothetical protein 538 49.52 +1 660602..661948 + 448 157960368 - Spea_0539 - outer membrane efflux family protein, putative 539 50.51 +1 661959..663338 + 459 157960369 - Spea_0540 - RND family efflux transporter MFP subunit 540 51.75 +2 663351..666575 + 1074 157960370 - Spea_0541 - CzcA family heavy metal efflux protein 541 43.79 0 666874..667179 - 101 157960371 - Spea_0542 - hypothetical protein 542 49.60 +1 667460..668344 + 294 157960372 - Spea_0543 - penicillin-insensitive murein endopeptidase 543 48.78 +1 668459..670744 - 761 157960373 - Spea_0544 - aminotransferase class V 544 42.27 0 671034..671570 - 178 157960374 - Spea_0545 - hypothetical protein 545 41.34 -1 671678..672139 - 153 157960375 - Spea_0546 - hypothetical protein 546 47.08 0 672400..673461 + 353 157960376 - Spea_0547 - hypothetical protein 547 46.80 0 673614..674207 + 197 157960377 - Spea_0548 - ATP-dependent protease La 548 47.18 0 674518..675456 + 312 157960378 - Spea_0549 - pseudouridine synthase 549 48.44 0 675719..677605 - 628 157960379 - Spea_0550 - hypothetical protein 550 50.32 +1 677716..678639 + 307 157960380 - Spea_0551 - dTDP-4-dehydrorhamnose reductase 551 50.42 +1 678668..679990 + 440 157960381 - Spea_0552 - histidine kinase 552 46.30 0 679983..680522 + 179 157960382 - Spea_0553 - two component Fis family transcriptional regulator 553 47.78 0 680705..681853 - 382 157960383 - Spea_0554 - sulphate transporter 554 47.50 0 682132..682851 - 239 157960384 - Spea_0555 - short-chain dehydrogenase/reductase SDR 555 45.14 0 682998..683912 + 304 157960385 - Spea_0556 - LysR family transcriptional regulator 556 46.90 0 684117..685310 + 397 157960386 - Spea_0557 - putative plasmid transfer protein 557 47.27 0 685317..686048 - 243 157960387 - Spea_0558 - hypothetical protein 558 44.13 0 686241..686555 - 104 157960388 - Spea_0559 - transcriptional repressor protein MetJ 559 49.27 +1 686767..687927 + 386 157960389 - Spea_0560 - O-succinylhomoserine (thiol)-lyase 560 48.87 +1 687943..690336 + 797 157960390 - Spea_0561 - bifunctional aspartate kinase II/homoserine dehydrogenase II 561 48.04 0 690542..691432 + 296 157960391 - Spea_0562 - 5,10-methylenetetrahydrofolate reductase 562 40.42 -1 691591..691971 + 126 157960392 - Spea_0563 - hypothetical protein 563 45.61 0 692027..692311 + 94 157960393 - Spea_0564 - hypothetical protein 564 42.64 0 692368..693345 + 325 157960394 - Spea_0565 - hypothetical protein 565 46.42 0 693864..695735 - 623 157960395 - Spea_0566 - DEAD/DEAH box helicase domain-containing protein 566 47.47 0 695953..696921 - 322 157960396 - Spea_0567 - peptidase M28 567 44.64 0 696984..697319 - 111 157960397 - Spea_0568 - hypothetical protein 568 48.03 0 697337..700180 - 947 157960398 - Spea_0569 - excinuclease ABC, A subunit 569 48.10 0 700446..701813 + 455 157960399 - Spea_0570 - major facilitator transporter 570 50.37 +1 701847..702515 + 222 157960400 - Spea_0571 - single-strand binding protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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