IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
470	 44.31	0	580895..581914	-	339	157960300	-	Spea_0471	-	putative esterase
471	 42.28	0	582132..583238	+	368	157960301	-	Spea_0472	-	hypothetical protein
472	 48.01	0	583314..583892	-	192	157960302	-	Spea_0473	-	hypothetical protein
473	 43.52	0	584044..584259	-	71	157960303	-	Spea_0474	-	hypothetical protein
474	 48.04	0	584666..586195	+	509	157960304	-	Spea_0475	-	Na+/H+ antiporter NhaC
475	 47.57	0	586492..587025	-	177	157960305	-	Spea_0476	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
476	 46.98	0	587069..587515	-	148	157960306	-	Spea_0477	-	cytochrome C biogenesis protein
477	 47.76	0	587512..589494	-	660	157960307	-	Spea_0478	-	cytochrome c-type biogenesis protein CcmF
478	 45.66	0	590051..592087	+	678	157960308	-	Spea_0479	-	cytochrome c, putative
479	 43.36	0	592148..592576	+	142	157960309	-	Spea_0480	-	rhodanese domain-containing protein
480	 46.39	0	592614..593417	+	267	157960310	-	Spea_0481	-	peptidylprolyl isomerase FK