IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
447	 46.36	0	556787..557707	-	306	157960277	-	Spea_0448	-	LysR family transcriptional regulator
448	 45.08	0	557869..558234	+	121	157960278	-	Spea_0449	-	hypothetical protein
449	 48.16	0	558677..560740	+	687	157960279	-	Spea_0450	-	hypothetical protein
450	 45.10	0	561005..561463	+	152	157960280	-	Spea_0451	-	GCN5-related N-acetyltransferase
451	 43.09	0	561549..561794	-	81	157960281	-	Spea_0452	-	hypothetical protein
452	 47.68	0	561972..562856	+	294	157960282	-	Spea_0453	-	radical SAM domain-containing protein
453	 47.18	0	562872..563810	-	312	157960283	-	Spea_0454	-	LysR family transcriptional regulator
454	 45.66	0	563807..564739	-	310	157960284	-	Spea_0455	-	LysR family transcriptional regulator
455	 45.92	0	565038..566078	-	346	157960285	-	Spea_0456	-	OmpA domain-containing protein
456	 43.37	0	566318..567154	-	278	157960286	-	Spea_0457	-	MscS mechanosensitive ion channel
457	 41.83	-1	567367..567825	+	152	157960287	-	Spea_0458	-	hypothetical protein
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