IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
433	 48.99	+1	540140..541525	+	461	157960263	-	Spea_0434	-	permease
434	 46.58	0	541687..542343	+	218	157960264	-	Spea_0435	-	DSBA oxidoreductase
435	 44.19	0	542356..542751	+	131	157960265	-	Spea_0436	-	putative thiol-disulphide oxidoreductase DCC
436	 48.45	0	543585..544166	+	193	157960266	-	Spea_0437	-	molybdopterin oxidoreductase Fe4S4 region
437	 47.34	0	544215..546605	+	796	157960267	-	Spea_0438	-	formate dehydrogenase, alpha subunit
438	 49.50	+1	546608..547510	+	300	157960268	-	Spea_0439	-	formate dehydrogenase, beta subunit
439	 47.60	0	547516..548160	+	214	157960269	-	Spea_0440	-	formate dehydrogenase, gamma subunit
440	 51.34	+1	548163..549134	+	323	157960270	-	Spea_0441	-	formate dehydrogenase accessory protein FdhE
441	 50.10	+1	549258..550748	+	496	157960271	-	Spea_0442	-	selenocysteine synthase
442	 48.48	+1	550745..552652	+	635	157960272	-	Spea_0443	-	selenocysteine-specific translation elongation factor
443	 40.16	-1	553011..553874	+	287	15796027