IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
424	 47.38	0	526341..528938	+	865	157960254	-	Spea_0425	-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
425	 42.74	0	529135..529602	-	155	157960255	-	Spea_0426	-	anti-RNA polymerase sigma 70 factor
426	 45.54	0	530134..531198	+	354	157960256	-	Spea_0427	-	uroporphyrinogen decarboxylase
427	 44.56	0	531806..534379	+	857	157960257	-	Spea_0428	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
428	 47.51	0	534487..535290	+	267	157960258	-	Spea_0429	-	short chain dehydrogenase
429	 45.66	0	535323..535541	-	72	157960259	-	Spea_0430	-	hypothetical protein
430	 48.85	+1	536172..537473	-	433	157960260	-	Spea_0431	-	phosphoribosylamine--glycine ligase
431	 48.36	0	537651..539240	-	529	157960261	-	Spea_0432	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
432	 45.98	0	539597..540118	+	173	157960262	-	Spea_0433	-	zinc-responsive transcriptional regulator
433	 48.99	+1	540140..541525	+	461	157960263	-	Spea_0434	-	permease
434	 46.58	0	541687..542343	+	218