version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 413 42.51 0 507007..507453 - 148 157960243 - Spea_0414 - methylation site containing protein 414 46.33 0 508211..509095 - 294 157960244 - Spea_0415 - nicotinate-nucleotide pyrophosphorylase 415 46.59 0 509338..509880 + 180 157960245 - Spea_0416 - N-acetyl-anhydromuranmyl-L-alanine amidase 416 43.58 0 509947..510795 + 282 157960246 - Spea_0417 - regulatory protein AmpE 417 45.68 0 511158..511910 + 250 157960247 - Spea_0418 - transcriptional regulator PdhR 418 44.87 0 512019..514679 + 886 157960248 - Spea_0419 - pyruvate dehydrogenase subunit E1 419 46.65 0 514693..516555 + 620 157960249 - Spea_0420 - dihydrolipoamide acetyltransferase 420 45.31 0 516799..518226 + 475 157960250 - Spea_0421 - dihydrolipoamide dehydrogenase 421 44.45 0 518372..522850 + 1492 157960251 - Spea_0422 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 422 45.69 0 522943..525159 + 738 157960252 - Spea_0423 - patatin 423 43.50 0 525248..525916 - 222 157960253 - Spea_0424 - 2-deoxyglucose-6-phosphatase 424 47.38 0 526341..528938 + 865 157960254 - Spea_0425 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 425 42.74 0 529135..529602 - 155 157960255 - Spea_0426 - anti-RNA polymerase sigma 70 factor 426 45.54 0 530134..531198 + 354 157960256 - Spea_0427 - uroporphyrinogen decarboxylase 427 44.56 0 531806..534379 + 857 157960257 - Spea_0428 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 428 47.51 0 534487..535290 + 267 157960258 - Spea_0429 - short chain dehydrogenase 429 45.66 0 535323..535541 - 72 157960259 - Spea_0430 - hypothetical protein 430 48.85 +1 536172..537473 - 433 157960260 - Spea_0431 - phosphoribosylamine--glycine ligase 431 48.36 0 537651..539240 - 529 157960261 - Spea_0432 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 432 45.98 0 539597..540118 + 173 157960262 - Spea_0433 - zinc-responsive transcriptional regulator 433 48.99 +1 540140..541525 + 461 157960263 - Spea_0434 - permease 434 46.58 0 541687..542343 + 218 157960264 - Spea_0435 - DSBA oxidoreductase 435 44.19 0 542356..542751 + 131 157960265 - Spea_0436 - putative thiol-disulphide oxidoreductase DCC 436 48.45 0 543585..544166 + 193 157960266 - Spea_0437 - molybdopterin oxidoreductase Fe4S4 region 437 47.34 0 544215..546605 + 796 157960267 - Spea_0438 - formate dehydrogenase, alpha subunit 438 49.50 +1 546608..547510 + 300 157960268 - Spea_0439 - formate dehydrogenase, beta subunit 439 47.60 0 547516..548160 + 214 157960269 - Spea_0440 - formate dehydrogenase, gamma subunit 440 51.34 +1 548163..549134 + 323 157960270 - Spea_0441 - formate dehydrogenase accessory protein FdhE 441 50.10 +1 549258..550748 + 496 157960271 - Spea_0442 - selenocysteine synthase 442 48.48 +1 550745..552652 + 635 157960272 - Spea_0443 - selenocysteine-specific translation elongation factor 443 40.16 -1 553011..553874 + 287 157960273 - Spea_0444 - formate dehydrogenase family accessory protein FdhD 444 48.51 +1 553920..555191 + 423 157960274 - Spea_0445 - putative inner membrane protein 445 44.73 0 555278..555514 + 78 157960275 - Spea_0446 - hypothetical protein 446 46.23 0 555907..556635 - 242 157960276 - Spea_0447 - hypothetical protein 447 46.36 0 556787..557707 - 306 157960277 - Spea_0448 - LysR family transcriptional regulator 448 45.08 0 557869..558234 + 121 157960278 - Spea_0449 - hypothetical protein 449 48.16 0 558677..560740 + 687 157960279 - Spea_0450 - hypothetical protein 450 45.10 0 561005..561463 + 152 157960280 - Spea_0451 - GCN5-related N-acetyltransferase 451 43.09 0 561549..561794 - 81 157960281 - Spea_0452 - hypothetical protein 452 47.68 0 561972..562856 + 294 157960282 - Spea_0453 - radical SAM domain-containing protein 453 47.18 0 562872..563810 - 312 157960283 - Spea_0454 - LysR family transcriptional regulator 454 45.66 0 563807..564739 - 310 157960284 - Spea_0455 - LysR family transcriptional regulator 455 45.92 0 565038..566078 - 346 157960285 - Spea_0456 - OmpA domain-containing protein 456 43.37 0 566318..567154 - 278 157960286 - Spea_0457 - MscS mechanosensitive ion channel 457 41.83 -1 567367..567825 + 152 157960287 - Spea_0458 - hypothetical protein 458 39.35 -1 567896..568111 - 71 157960288 - Spea_0459 - hypothetical protein 459 49.01 +1 568608..569366 + 252 157960289 - Spea_0460 - uridine phosphorylase 460 42.90 0 569440..570192 - 250 157960290 - Spea_0461 - hypothetical protein 461 45.83 0 570582..571061 + 159 157960291 - Spea_0462 - hypothetical protein 462 48.49 +1 571090..572019 + 309 157960292 - Spea_0463 - band 7 protein 463 47.82 0 572019..572957 + 312 157960293 - Spea_0464 - band 7 protein 464 45.41 0 573068..573481 + 137 157960294 - Spea_0465 - NUDIX hydrolase 465 45.29 0 573816..575906 - 696 157960295 - Spea_0466 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 466 46.05 0 576330..576683 + 117 157960296 - Spea_0467 - endoribonuclease L-PSP 467 49.40 +1 576841..579006 + 721 157960297 - Spea_0468 - DNA-dependent helicase II 468 47.40 0 579168..580034 + 288 157960298 - Spea_0469 - 4-hydroxybenzoate octaprenyltransferase 469 46.14 0 580298..580828 + 176 157960299 - Spea_0470 - hypothetical protein 470 44.31 0 580895..581914 - 339 157960300 - Spea_0471 - putative esterase 471 42.28 0 582132..583238 + 368 157960301 - Spea_0472 - hypothetical protein 472 48.01 0 583314..583892 - 192 157960302 - Spea_0473 - hypothetical protein 473 43.52 0 584044..584259 - 71 157960303 - Spea_0474 - hypothetical protein 474 48.04 0 584666..586195 + 509 157960304 - Spea_0475 - Na+/H+ antiporter NhaC 475 47.57 0 586492..587025 - 177 157960305 - Spea_0476 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 476 46.98 0 587069..587515 - 148 157960306 - Spea_0477 - cytochrome C biogenesis protein 477 47.76 0 587512..589494 - 660 157960307 - Spea_0478 - cytochrome c-type biogenesis protein CcmF 478 45.66 0 590051..592087 + 678 157960308 - Spea_0479 - cytochrome c, putative 479 43.36 0 592148..592576 + 142 157960309 - Spea_0480 - rhodanese domain-containing protein 480 46.39 0 592614..593417 + 267 157960310 - Spea_0481 - peptidylprolyl isomerase FKBP-type 481 40.38 -1 593449..594186 + 245 157960311 - Spea_0482 - hypothetical protein 482 47.74 0 594264..594971 + 235 157960312 - Spea_0483 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 483 45.89 0 594974..595921 + 315 157960313 - Spea_0484 - polysulphide reductase NrfD 484 48.67 +1 596272..596760 + 162 157960314 - Spea_0485 - NosL family protein 485 49.22 +1 596830..598170 + 446 157960315 - Spea_0486 - periplasmic copper-binding 486 49.39 +1 598170..599147 + 325 157960316 - Spea_0487 - ABC transporter related 487 45.63 0 599149..599994 + 281 157960317 - Spea_0488 - copper ABC transporter, permease protein 488 43.61 0 600202..601485 + 427 157960318 - Spea_0489 - transcriptional regulator, CadC 489 37.25 -2 602626..603084 - 152 157960319 - Spea_0490 - hypothetical protein 490 36.99 -2 603137..603382 - 81 157960320 - Spea_0491 - hypothetical protein 491 48.04 0 603830..604135 + 101 157960321 - Spea_0492 - hypothetical protein 492 35.00 -2 604262..604921 - 219 157960322 - Spea_0493 - lysine exporter protein LysE/YggA 493 44.93 0 605426..605563 + 45 157960323 - Spea_0494 - hypothetical protein 494 40.35 -1 605743..605913 + 56 157960324 - Spea_0495 - hypothetical protein 495 38.71 -1 606457..607014 + 185 157960325 - Spea_0496 - hypothetical protein 496 41.87 -1 607120..608490 + 456 157960326 - Spea_0497 - FNIP 497 48.87 +1 608893..611712 + 939 157960327 - Spea_0498 - hypothetical protein 498 44.28 0 612325..613329 + 334 157960328 - Spea_0499 - hypothetical protein 499 47.27 0 614099..614428 + 109 157960329 - Spea_0500 - ferredoxin 500 42.17 0 614605..615147 + 180 157960330 - Spea_0501 - RNA polymerase sigma factor SigZ 501 41.46 -1 615214..615927 + 237 157960331 - Spea_0502 - glutathione S-transferase domain-containing protein 502 44.95 0 616645..618675 + 676 157960332 - Spea_0503 - cytochrome c, putative 503 45.75 0 618715..619173 + 152 157960333 - Spea_0504 - rhodanese domain-containing protein 504 44.66 0 619233..620018 + 261 157960334 - Spea_0505 - peptidylprolyl isomerase FKBP-type 505 41.04 -1 620104..620817 + 237 157960335 - Spea_0506 - TPR repeat-containing protein 506 46.13 0 620880..621590 + 236 157960336 - Spea_0507 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 507 44.62 0 621593..622540 + 315 157960337 - Spea_0508 - polysulphide reductase NrfD 508 49.28 +1 622713..623201 + 162 157960338 - Spea_0509 - NosL family protein 509 46.59 0 623257..624576 + 439 157960339 - Spea_0510 - periplasmic copper-binding 510 47.63 0 624672..625580 + 302 157960340 - Spea_0511 - ABC transporter related 511 42.30 0 625582..626406 + 274 157960341 - Spea_0512 - ABC-2 type transporter 512 43.15 0 626672..627955 + 427 157960342 - Spea_0513 - transcriptional regulator, CadC 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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