IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
409	 41.09	-1	502382..502987	-	201	157960239	-	Spea_0410	-	dephospho-CoA kinase
410	 45.61	0	503007..503918	-	303	157960240	-	Spea_0411	-	prepilin peptidase
411	 46.41	0	503951..505219	-	422	157960241	-	Spea_0412	-	type II secretion system protein
412	 47.22	0	505266..506972	-	568	157960242	-	Spea_0413	-	type IV-A pilus assembly ATPase PilB
413	 42.51	0	507007..507453	-	148	157960243	-	Spea_0414	-	methylation site containing protein
414	 46.33	0	508211..509095	-	294	157960244	-	Spea_0415	-	nicotinate-nucleotide pyrophosphorylase
415	 46.59	0	509338..509880	+	180	157960245	-	Spea_0416	-	N-acetyl-anhydromuranmyl-L-alanine amidase
416	 43.58	0	509947..510795	+	282	157960246	-	Spea_0417	-	regulatory protein AmpE
417	 45.68	0	511158..511910	+	250	157960247	-	Spea_0418	-	transcriptional regulator PdhR
418	 44.87	0	512019..514679	+	886	157960248	-	Spea_0419	-	pyruvate dehydrogenase subunit E1
419	 46.65	0	514693..516555	+	620	157960249	-	Spea_0420	-	dihydrolipoamide