IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
406	 42.31	0	500954..501343	-	129	157960236	-	Spea_0407	-	mutator MutT protein
407	 41.25	-1	501340..501579	-	79	157960237	-	Spea_0408	-	hypothetical protein
408	 43.13	0	501639..502373	-	244	157960238	-	Spea_0409	-	hypothetical protein
409	 41.09	-1	502382..502987	-	201	157960239	-	Spea_0410	-	dephospho-CoA kinase
410	 45.61	0	503007..503918	-	303	157960240	-	Spea_0411	-	prepilin peptidase
411	 46.41	0	503951..505219	-	422	157960241	-	Spea_0412	-	type II secretion system protein
412	 47.22	0	505266..506972	-	568	157960242	-	Spea_0413	-	type IV-A pilus assembly ATPase PilB
413	 42.51	0	507007..507453	-	148	157960243	-	Spea_0414	-	methylation site containing protein
414	 46.33	0	508211..509095	-	294	157960244	-	Spea_0415	-	nicotinate-nucleotide pyrophosphorylase
415	 46.59	0	509338..509880	+	180	157960245	-	Spea_0416	-	N-acetyl-anhydromuranmyl-L-alanine amidase
416	 43.58	0	509947..510795	+	282	157960246	-	Spea_0417	-	regulatory protein AmpE
417	 45.68	0	51115