IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
399	 43.42	0	482881..483792	+	303	157960229	-	Spea_0400	-	Ppx/GppA phosphatase
400	 42.32	0	484439..487420	+	993	157960230	-	Spea_0401	-	TonB-dependent receptor
401	 41.60	-1	487518..487916	+	132	157960231	-	Spea_0402	-	transposase
402	 39.71	-1	488000..488752	+	250	157960232	-	Spea_0403	-	integrase catalytic region
403	 43.11	0	489235..491925	+	896	157960233	-	Spea_0404	-	TonB-dependent receptor
404	 39.14	-1	492003..492536	-	177	157960234	-	Spea_0405	-	hypothetical protein
405	 42.08	0	499518..500534	-	338	157960235	-	Spea_0406	-	transposase IS116/IS110/IS902 family protein
406	 42.31	0	500954..501343	-	129	157960236	-	Spea_0407	-	mutator MutT protein
407	 41.25	-1	501340..501579	-	79	157960237	-	Spea_0408	-	hypothetical protein
408	 43.13	0	501639..502373	-	244	157960238	-	Spea_0409	-	hypothetical protein
409	 41.09	-1	502382..502987	-	201	157960239	-	Spea_0410	-	dephospho-CoA kinase
410	 45.61	0	503007..503918	-	303