IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
394	 46.91	0	477474..478217	+	247	157960224	-	Spea_0395	-	fumarate reductase iron-sulfur subunit
395	 48.63	+1	478350..479264	+	304	157960225	-	Spea_0396	-	LysR family transcriptional regulator
396	 43.84	0	479324..480589	-	421	157960226	-	Spea_0397	-	transcription termination factor Rho
397	 43.43	0	480827..481153	-	108	157960227	-	Spea_0398	-	thioredoxin
398	 44.70	0	481557..482867	+	436	157960228	-	Spea_0399	-	ATP-dependent RNA helicase RhlB
399	 43.42	0	482881..483792	+	303	157960229	-	Spea_0400	-	Ppx/GppA phosphatase
400	 42.32	0	484439..487420	+	993	157960230	-	Spea_0401	-	TonB-dependent receptor
401	 41.60	-1	487518..487916	+	132	157960231	-	Spea_0402	-	transposase
402	 39.71	-1	488000..488752	+	250	157960232	-	Spea_0403	-	integrase catalytic region
403	 43.11	0	489235..491925	+	896	157960233	-	Spea_0404	-	TonB-dependent receptor
404	 39.14	-1	492003..492536	-	177	157960234	-	Spea_0405	-	hypothetical protein
405	 42.08	0	499518..500534	-	338