IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
388	 44.77	0	471188..471493	-	101	157960218	-	Spea_0389	-	Fis family transcriptional regulator
389	 46.85	0	471511..472479	-	322	157960219	-	Spea_0390	-	nifR3 family TIM-barrel protein
390	 47.17	0	472631..473512	-	293	157960220	-	Spea_0391	-	ribosomal protein L11 methyltransferase
391	 45.39	0	473880..474584	+	234	157960221	-	Spea_0392	-	fumarate reductase cytochrome b-556 subunit
392	 47.41	0	474746..475420	+	224	157960222	-	Spea_0393	-	fumarate reductase respiratory complex transmembrane subunit
393	 48.93	+1	475477..477477	+	666	157960223	-	Spea_0394	-	fumarate reductase flavoprotein subunit
394	 46.91	0	477474..478217	+	247	157960224	-	Spea_0395	-	fumarate reductase iron-sulfur subunit
395	 48.63	+1	478350..479264	+	304	157960225	-	Spea_0396	-	LysR family transcriptional regulator
396	 43.84	0	479324..480589	-	421	157960226	-	Spea_0397	-	transcription termination factor Rho
397	 43.43	0	480827..481153	-	108	157960227	-	Spea_0398	-	thioredoxin
398	 44.70	0	481557..482867	+	436