IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4142	 41.41	-1	5052776..5053171	+	131	157963972	-	Spea_4161	-	hypothetical protein
4143	 46.61	0	5053349..5054011	+	220	157963973	-	Spea_4162	-	hypothetical protein
4144	 40.76	-1	5054242..5054982	+	246	157963974	-	Spea_4163	-	hypothetical protein
4145	 46.67	0	5055063..5056082	+	339	157963975	-	Spea_4164	-	1-aminocyclopropane-1-carboxylate deaminase
4146	 49.54	+1	5056193..5057599	+	468	157963976	-	Spea_4165	-	Na+/H+ antiporter NhaC
4147	 46.25	0	5057672..5058058	+	128	157963977	-	Spea_4166	-	putative endoribonuclease L-PSP
4148	 46.95	0	5058192..5059094	-	300	157963978	-	Spea_4167	-	LysR family transcriptional regulator
4149	 52.90	+2	5059501..5061033	-	510	157963979	-	Spea_4168	-	histidine ammonia-lyase
4150	 51.39	+1	5061037..5062725	-	562	157963980	-	Spea_4169	-	urocanate hydratase
4151	 48.51	+1	5062857..5063561	-	234	157963981	-	Spea_4170	-	histidine utilization repressor
4152	 52.53	+2	5063725..5064969	+	414	157963982	-	Spea_4171	-	imidazol