IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4123	 46.79	0	5032728..5033195	-	155	157963953	-	Spea_4142	-	hypothetical protein
4124	 44.48	0	5033480..5034322	+	280	157963954	-	Spea_4143	-	formate dehydrogenase subunit FdhD
4125	 50.33	+1	5034370..5035275	+	301	157963955	-	Spea_4144	-	DNA binding domain-containing protein
4126	 46.24	0	5035287..5035658	-	123	157963956	-	Spea_4145	-	hypothetical protein
4127	 47.42	0	5035780..5036922	-	380	157963957	-	Spea_4146	-	putative SAM-dependent methyltransferase
4128	 40.30	-1	5036980..5037381	-	133	157963958	-	Spea_4147	-	flagellar basal body-associated protein FliL-like protein
4129	 47.31	0	5037533..5038090	+	185	157963959	-	Spea_4148	-	chorismate lyase
4130	 46.50	0	5038145..5040961	-	938	157963960	-	Spea_4149	-	peptidase M6 immune inhibitor A
4131	 43.00	0	5040963..5041262	-	99	157963961	-	Spea_4150	-	hypothetical protein
4132	 49.54	+1	5041406..5043571	-	721	157963962	-	Spea_4151	-	glycoside hydrolase family protein
4133	 47.74	0	5043761..5044357	-	198