IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4115	 45.45	0	5023582..5023779	-	65	157963945	-	Spea_4134	-	formate dehydrogenase region TAT target
4116	 45.24	0	5024654..5025661	-	335	157963946	-	Spea_4135	-	formate dehydrogenase, gamma subunit
4117	 50.51	+1	5025715..5026302	-	195	157963947	-	Spea_4136	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4118	 48.00	0	5026329..5029178	-	949	157963948	-	Spea_4137	-	molybdopterin oxidoreductase
4119	 51.24	+1	5029194..5029394	-	66	157963949	-	Spea_4138	-	formate dehydrogenase region TAT target
4120	 46.52	0	5029569..5030243	-	224	157963950	-	Spea_4139	-	cytoplasmic chaperone TorD family protein
4121	 46.90	0	5030254..5031933	-	559	157963951	-	Spea_4140	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4122	 44.85	0	5032081..5032731	-	216	157963952	-	Spea_4141	-	hypothetical protein
4123	 46.79	0	5032728..5033195	-	155	157963953	-	Spea_4142	-	hypothetical protein
4124	 44.48	0	5033480..5034322	+	280	157963954	-	Spea_4143	-	formate dehydrogenase subunit FdhD
4125	 50.33	+1	5034370..5035275	+	301