version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 366 47.98 0 423627..425804 - 725 157960196 - Spea_0367 - ABC transporter related 367 45.87 0 425898..442232 - 5444 157960197 - Spea_0368 - cadherin 368 46.13 0 442471..448674 - 2067 157960198 - Spea_0369 - putative outer membrane adhesin like proteiin 369 45.04 0 448956..450125 - 389 157960199 - Spea_0370 - HemY domain-containing protein 370 45.64 0 450125..451318 - 397 157960200 - Spea_0371 - protein of unknown function DUF513 hemX 371 46.58 0 451380..452111 - 243 157960201 - Spea_0372 - uroporphyrinogen III synthase HEM4 372 48.34 0 452118..453050 - 310 157960202 - Spea_0373 - porphobilinogen deaminase 373 46.66 0 453249..455672 + 807 157960203 - Spea_0374 - adenylate cyclase 374 39.09 -1 455758..456087 - 109 157960204 - Spea_0375 - frataxin family protein 375 45.27 0 456462..456662 + 66 157960205 - Spea_0376 - hypothetical protein 376 49.64 +1 456668..457912 + 414 157960206 - Spea_0377 - diaminopimelate decarboxylase 377 49.82 +1 457970..458806 + 278 157960207 - Spea_0378 - diaminopimelate epimerase 378 46.29 0 458803..459435 + 210 157960208 - Spea_0379 - hypothetical protein 379 48.09 0 459448..460362 + 304 157960209 - Spea_0380 - tyrosine recombinase XerC 380 45.33 0 460359..461075 + 238 157960210 - Spea_0381 - HAD family hydrolase 381 41.08 -1 461183..461647 + 154 157960211 - Spea_0382 - Egg lysin (Sperm-lysin) 382 46.47 0 461706..462428 - 240 157960212 - Spea_0383 - hypothetical protein 383 45.41 0 462769..463182 + 137 157960213 - Spea_0384 - hypothetical protein 384 48.63 +1 463306..464730 + 474 157960214 - Spea_0385 - outer membrane efflux protein 385 49.88 +1 464727..465953 + 408 157960215 - Spea_0386 - hypothetical protein 386 48.83 +1 465965..469120 + 1051 157960216 - Spea_0387 - CzcA family heavy metal efflux protein 387 48.08 0 469272..470804 - 510 157960217 - Spea_0388 - leucyl aminopeptidase 388 44.77 0 471188..471493 - 101 157960218 - Spea_0389 - Fis family transcriptional regulator 389 46.85 0 471511..472479 - 322 157960219 - Spea_0390 - nifR3 family TIM-barrel protein 390 47.17 0 472631..473512 - 293 157960220 - Spea_0391 - ribosomal protein L11 methyltransferase 391 45.39 0 473880..474584 + 234 157960221 - Spea_0392 - fumarate reductase cytochrome b-556 subunit 392 47.41 0 474746..475420 + 224 157960222 - Spea_0393 - fumarate reductase respiratory complex transmembrane subunit 393 48.93 +1 475477..477477 + 666 157960223 - Spea_0394 - fumarate reductase flavoprotein subunit 394 46.91 0 477474..478217 + 247 157960224 - Spea_0395 - fumarate reductase iron-sulfur subunit 395 48.63 +1 478350..479264 + 304 157960225 - Spea_0396 - LysR family transcriptional regulator 396 43.84 0 479324..480589 - 421 157960226 - Spea_0397 - transcription termination factor Rho 397 43.43 0 480827..481153 - 108 157960227 - Spea_0398 - thioredoxin 398 44.70 0 481557..482867 + 436 157960228 - Spea_0399 - ATP-dependent RNA helicase RhlB 399 43.42 0 482881..483792 + 303 157960229 - Spea_0400 - Ppx/GppA phosphatase 400 42.32 0 484439..487420 + 993 157960230 - Spea_0401 - TonB-dependent receptor 401 41.60 -1 487518..487916 + 132 157960231 - Spea_0402 - transposase 402 39.71 -1 488000..488752 + 250 157960232 - Spea_0403 - integrase catalytic region 403 43.11 0 489235..491925 + 896 157960233 - Spea_0404 - TonB-dependent receptor 404 39.14 -1 492003..492536 - 177 157960234 - Spea_0405 - hypothetical protein 405 42.08 0 499518..500534 - 338 157960235 - Spea_0406 - transposase IS116/IS110/IS902 family protein 406 42.31 0 500954..501343 - 129 157960236 - Spea_0407 - mutator MutT protein 407 41.25 -1 501340..501579 - 79 157960237 - Spea_0408 - hypothetical protein 408 43.13 0 501639..502373 - 244 157960238 - Spea_0409 - hypothetical protein 409 41.09 -1 502382..502987 - 201 157960239 - Spea_0410 - dephospho-CoA kinase 410 45.61 0 503007..503918 - 303 157960240 - Spea_0411 - prepilin peptidase 411 46.41 0 503951..505219 - 422 157960241 - Spea_0412 - type II secretion system protein 412 47.22 0 505266..506972 - 568 157960242 - Spea_0413 - type IV-A pilus assembly ATPase PilB 413 42.51 0 507007..507453 - 148 157960243 - Spea_0414 - methylation site containing protein 414 46.33 0 508211..509095 - 294 157960244 - Spea_0415 - nicotinate-nucleotide pyrophosphorylase 415 46.59 0 509338..509880 + 180 157960245 - Spea_0416 - N-acetyl-anhydromuranmyl-L-alanine amidase 416 43.58 0 509947..510795 + 282 157960246 - Spea_0417 - regulatory protein AmpE 417 45.68 0 511158..511910 + 250 157960247 - Spea_0418 - transcriptional regulator PdhR 418 44.87 0 512019..514679 + 886 157960248 - Spea_0419 - pyruvate dehydrogenase subunit E1 419 46.65 0 514693..516555 + 620 157960249 - Spea_0420 - dihydrolipoamide acetyltransferase 420 45.31 0 516799..518226 + 475 157960250 - Spea_0421 - dihydrolipoamide dehydrogenase 421 44.45 0 518372..522850 + 1492 157960251 - Spea_0422 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 422 45.69 0 522943..525159 + 738 157960252 - Spea_0423 - patatin 423 43.50 0 525248..525916 - 222 157960253 - Spea_0424 - 2-deoxyglucose-6-phosphatase 424 47.38 0 526341..528938 + 865 157960254 - Spea_0425 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 425 42.74 0 529135..529602 - 155 157960255 - Spea_0426 - anti-RNA polymerase sigma 70 factor 426 45.54 0 530134..531198 + 354 157960256 - Spea_0427 - uroporphyrinogen decarboxylase 427 44.56 0 531806..534379 + 857 157960257 - Spea_0428 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 428 47.51 0 534487..535290 + 267 157960258 - Spea_0429 - short chain dehydrogenase 429 45.66 0 535323..535541 - 72 157960259 - Spea_0430 - hypothetical protein 430 48.85 +1 536172..537473 - 433 157960260 - Spea_0431 - phosphoribosylamine--glycine ligase 431 48.36 0 537651..539240 - 529 157960261 - Spea_0432 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 432 45.98 0 539597..540118 + 173 157960262 - Spea_0433 - zinc-responsive transcriptional regulator 433 48.99 +1 540140..541525 + 461 157960263 - Spea_0434 - permease 434 46.58 0 541687..542343 + 218 157960264 - Spea_0435 - DSBA oxidoreductase 435 44.19 0 542356..542751 + 131 157960265 - Spea_0436 - putative thiol-disulphide oxidoreductase DCC 436 48.45 0 543585..544166 + 193 157960266 - Spea_0437 - molybdopterin oxidoreductase Fe4S4 region 437 47.34 0 544215..546605 + 796 157960267 - Spea_0438 - formate dehydrogenase, alpha subunit 438 49.50 +1 546608..547510 + 300 157960268 - Spea_0439 - formate dehydrogenase, beta subunit 439 47.60 0 547516..548160 + 214 157960269 - Spea_0440 - formate dehydrogenase, gamma subunit 440 51.34 +1 548163..549134 + 323 157960270 - Spea_0441 - formate dehydrogenase accessory protein FdhE 441 50.10 +1 549258..550748 + 496 157960271 - Spea_0442 - selenocysteine synthase 442 48.48 +1 550745..552652 + 635 157960272 - Spea_0443 - selenocysteine-specific translation elongation factor 443 40.16 -1 553011..553874 + 287 157960273 - Spea_0444 - formate dehydrogenase family accessory protein FdhD 444 48.51 +1 553920..555191 + 423 157960274 - Spea_0445 - putative inner membrane protein 445 44.73 0 555278..555514 + 78 157960275 - Spea_0446 - hypothetical protein 446 46.23 0 555907..556635 - 242 157960276 - Spea_0447 - hypothetical protein 447 46.36 0 556787..557707 - 306 157960277 - Spea_0448 - LysR family transcriptional regulator 448 45.08 0 557869..558234 + 121 157960278 - Spea_0449 - hypothetical protein 449 48.16 0 558677..560740 + 687 157960279 - Spea_0450 - hypothetical protein 450 45.10 0 561005..561463 + 152 157960280 - Spea_0451 - GCN5-related N-acetyltransferase 451 43.09 0 561549..561794 - 81 157960281 - Spea_0452 - hypothetical protein 452 47.68 0 561972..562856 + 294 157960282 - Spea_0453 - radical SAM domain-containing protein 453 47.18 0 562872..563810 - 312 157960283 - Spea_0454 - LysR family transcriptional regulator 454 45.66 0 563807..564739 - 310 157960284 - Spea_0455 - LysR family transcriptional regulator 455 45.92 0 565038..566078 - 346 157960285 - Spea_0456 - OmpA domain-containing protein 456 43.37 0 566318..567154 - 278 157960286 - Spea_0457 - MscS mechanosensitive ion channel 457 41.83 -1 567367..567825 + 152 157960287 - Spea_0458 - hypothetical protein 458 39.35 -1 567896..568111 - 71 157960288 - Spea_0459 - hypothetical protein 459 49.01 +1 568608..569366 + 252 157960289 - Spea_0460 - uridine phosphorylase 460 42.90 0 569440..570192 - 250 157960290 - Spea_0461 - hypothetical protein 461 45.83 0 570582..571061 + 159 157960291 - Spea_0462 - hypothetical protein 462 48.49 +1 571090..572019 + 309 157960292 - Spea_0463 - band 7 protein 463 47.82 0 572019..572957 + 312 157960293 - Spea_0464 - band 7 protein 464 45.41 0 573068..573481 + 137 157960294 - Spea_0465 - NUDIX hydrolase 465 45.29 0 573816..575906 - 696 157960295 - Spea_0466 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0