IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4086	 45.05	0	4992251..4992916	-	221	157963916	-	Spea_4105	-	SNARE associated Golgi protein
4087	 48.53	+1	4993008..4994507	-	499	157963917	-	Spea_4106	-	hypothetical protein
4088	 45.00	0	4994514..4994993	-	159	157963918	-	Spea_4107	-	phosphopantetheine adenylyltransferase
4089	 49.57	+1	4995189..4995878	-	229	157963919	-	Spea_4108	-	pseudouridine synthase Rlu family protein
4090	 47.98	0	4995928..4997265	-	445	157963920	-	Spea_4109	-	histidine kinase
4091	 46.17	0	4997234..4997911	-	225	157963921	-	Spea_4110	-	two component transcriptional regulator
4092	 41.38	-1	4997915..4998436	-	173	157963922	-	Spea_4111	-	hypothetical protein
4093	 43.30	0	4998479..4998829	-	116	157963923	-	Spea_4112	-	hypothetical protein
4094	 50.59	+1	4998961..5000067	-	368	157963924	-	Spea_4113	-	ABC transporter related
4095	 51.40	+1	5000048..5000728	-	226	157963925	-	Spea_4114	-	molybdate ABC transporter, inner membrane subunit
4096	 47.82	0	5000728..5001507	-	259	15796392