IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4082	 49.24	+1	4986700..4988730	-	676	157963912	-	Spea_4101	-	Ig domain-containing protein
4083	 39.53	-1	4989087..4989473	-	128	157963913	-	Spea_4102	-	hypothetical protein
4084	 51.63	+1	4990869..4991327	+	152	157963914	-	Spea_4103	-	hypothetical protein
4085	 50.25	+1	4991397..4992212	+	271	157963915	-	Spea_4104	-	formamidopyrimidine-DNA glycosylase
4086	 45.05	0	4992251..4992916	-	221	157963916	-	Spea_4105	-	SNARE associated Golgi protein
4087	 48.53	+1	4993008..4994507	-	499	157963917	-	Spea_4106	-	hypothetical protein
4088	 45.00	0	4994514..4994993	-	159	157963918	-	Spea_4107	-	phosphopantetheine adenylyltransferase
4089	 49.57	+1	4995189..4995878	-	229	157963919	-	Spea_4108	-	pseudouridine synthase Rlu family protein
4090	 47.98	0	4995928..4997265	-	445	157963920	-	Spea_4109	-	histidine kinase
4091	 46.17	0	4997234..4997911	-	225	157963921	-	Spea_4110	-	two component transcriptional regulator
4092	 41.38	-1	4997915..4998436	-	173	157963922	-