IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4053	 47.87	0	4950560..4951660	-	366	157963883	-	Spea_4072	-	NADH:flavin oxidoreductase/NADH oxidase
4054	 47.64	0	4952031..4953134	+	367	157963884	-	Spea_4073	-	hypothetical protein
4055	 48.40	0	4954050..4955204	-	384	157963885	-	Spea_4074	-	amidohydrolase
4056	 45.69	0	4955287..4956273	-	328	157963886	-	Spea_4075	-	hypothetical protein
4057	 47.17	0	4956313..4957143	-	276	157963887	-	Spea_4076	-	Asp/Glu racemase
4058	 48.16	0	4957158..4958324	-	388	157963888	-	Spea_4077	-	peptidase M24
4059	 42.29	0	4958664..4959344	+	226	157963889	-	Spea_4078	-	YheO domain-containing protein
4060	 44.53	0	4959364..4959747	+	127	157963890	-	Spea_4079	-	putative endoribonuclease L-PSP
4061	 47.24	0	4959855..4961033	+	392	157963891	-	Spea_4080	-	diaminopropionate ammonia-lyase
4062	 49.03	+1	4961634..4962614	+	326	157963892	-	Spea_4081	-	hypothetical protein
4063	 47.48	0	4963119..4963832	-	237	157963893	-	Spea_4082	-	ThiJ/PfpI domain-containing protein
4064	 46.0