IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4050	 41.41	-1	4946724..4947107	+	127	157963880	-	Spea_4069	-	transposase
4051	 43.62	0	4947224..4947952	+	242	157963881	-	Spea_4070	-	integrase catalytic region
4052	 45.06	0	4948040..4949992	-	650	157963882	-	Spea_4071	-	choline/carnitine/betaine transporter
4053	 47.87	0	4950560..4951660	-	366	157963883	-	Spea_4072	-	NADH:flavin oxidoreductase/NADH oxidase
4054	 47.64	0	4952031..4953134	+	367	157963884	-	Spea_4073	-	hypothetical protein
4055	 48.40	0	4954050..4955204	-	384	157963885	-	Spea_4074	-	amidohydrolase
4056	 45.69	0	4955287..4956273	-	328	157963886	-	Spea_4075	-	hypothetical protein
4057	 47.17	0	4956313..4957143	-	276	157963887	-	Spea_4076	-	Asp/Glu racemase
4058	 48.16	0	4957158..4958324	-	388	157963888	-	Spea_4077	-	peptidase M24
4059	 42.29	0	4958664..4959344	+	226	157963889	-	Spea_4078	-	YheO domain-containing protein
4060	 44.53	0	4959364..4959747	+	127	157963890	-	Spea_4079	-	putative endoribonuclease L-PSP
4061	 47.24	0	4959855.