IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4043	 47.39	0	4938769..4939458	-	229	157963873	-	Spea_4062	-	3-methyladenine DNA glycosylase
4044	 45.73	0	4939601..4940302	+	233	157963874	-	Spea_4063	-	glutathione S-transferase domain-containing protein
4045	 43.63	0	4940533..4941105	-	190	157963875	-	Spea_4064	-	hypothetical protein
4046	 50.34	+1	4941228..4943267	-	679	157963876	-	Spea_4065	-	oligopeptidase A
4047	 45.09	0	4943450..4944325	+	291	157963877	-	Spea_4066	-	hypothetical protein
4048	 52.38	+2	4944484..4944966	+	160	157963878	-	Spea_4067	-	hypothetical protein
4049	 50.29	+1	4945269..4946624	+	451	157963879	-	Spea_4068	-	glutathione reductase
4050	 41.41	-1	4946724..4947107	+	127	157963880	-	Spea_4069	-	transposase
4051	 43.62	0	4947224..4947952	+	242	157963881	-	Spea_4070	-	integrase catalytic region
4052	 45.06	0	4948040..4949992	-	650	157963882	-	Spea_4071	-	choline/carnitine/betaine transporter
4053	 47.87	0	4950560..4951660	-	366	157963883	-	Spea_4072	-	NADH:flavin oxidoreducta