IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4032	 45.42	0	4922094..4922333	-	79	157963862	-	Spea_4051	-	hypothetical protein
4033	 47.78	0	4922889..4923767	-	292	157963863	-	Spea_4052	-	LysR family transcriptional regulator
4034	 45.99	0	4924017..4925414	+	465	157963864	-	Spea_4053	-	multidrug efflux pump VmrA
4035	 50.94	+1	4925574..4926317	-	247	157963865	-	Spea_4054	-	lytic transglycosylase catalytic
4036	 42.13	0	4926314..4927336	-	340	157963866	-	Spea_4055	-	hypothetical protein
4037	 46.67	0	4927424..4927993	-	189	157963867	-	Spea_4056	-	LemA family protein
4038	 48.89	+1	4929085..4930704	+	539	157963868	-	Spea_4057	-	AbgT putative transporter
4039	 47.53	0	4931239..4932858	+	539	157963869	-	Spea_4058	-	AbgT putative transporter
4040	 48.75	+1	4933159..4933716	+	185	157963870	-	Spea_4059	-	phosphodiesterase
4041	 47.39	0	4934084..4937242	-	1052	157963871	-	Spea_4060	-	hydrophobe/amphiphile efflux-1 (HAE1) family protein
4042	 45.83	0	4937252..4938403	-	383	157963872	-	Spea_4061	-	RND f