IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4027	 40.87	-1	4914603..4915862	-	419	157963857	-	Spea_4046	-	hypothetical protein
4028	 49.61	+1	4916115..4916876	-	253	157963858	-	Spea_4047	-	hypothetical protein
4029	 47.06	0	4917157..4919451	+	764	157963859	-	Spea_4048	-	hypothetical protein
4030	 45.81	0	4919772..4921013	+	413	157963860	-	Spea_4049	-	transcriptional regulator, CadC
4031	 47.09	0	4921070..4921912	+	280	157963861	-	Spea_4050	-	hypothetical protein
4032	 45.42	0	4922094..4922333	-	79	157963862	-	Spea_4051	-	hypothetical protein
4033	 47.78	0	4922889..4923767	-	292	157963863	-	Spea_4052	-	LysR family transcriptional regulator
4034	 45.99	0	4924017..4925414	+	465	157963864	-	Spea_4053	-	multidrug efflux pump VmrA
4035	 50.94	+1	4925574..4926317	-	247	157963865	-	Spea_4054	-	lytic transglycosylase catalytic
4036	 42.13	0	4926314..4927336	-	340	157963866	-	Spea_4055	-	hypothetical protein
4037	 46.67	0	4927424..4927993	-	189	157963867	-	Spea_4056	-	LemA family protein
4038	 48.89	+