version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4027 40.87 -1 4914603..4915862 - 419 157963857 - Spea_4046 - hypothetical protein 4028 49.61 +1 4916115..4916876 - 253 157963858 - Spea_4047 - hypothetical protein 4029 47.06 0 4917157..4919451 + 764 157963859 - Spea_4048 - hypothetical protein 4030 45.81 0 4919772..4921013 + 413 157963860 - Spea_4049 - transcriptional regulator, CadC 4031 47.09 0 4921070..4921912 + 280 157963861 - Spea_4050 - hypothetical protein 4032 45.42 0 4922094..4922333 - 79 157963862 - Spea_4051 - hypothetical protein 4033 47.78 0 4922889..4923767 - 292 157963863 - Spea_4052 - LysR family transcriptional regulator 4034 45.99 0 4924017..4925414 + 465 157963864 - Spea_4053 - multidrug efflux pump VmrA 4035 50.94 +1 4925574..4926317 - 247 157963865 - Spea_4054 - lytic transglycosylase catalytic 4036 42.13 0 4926314..4927336 - 340 157963866 - Spea_4055 - hypothetical protein 4037 46.67 0 4927424..4927993 - 189 157963867 - Spea_4056 - LemA family protein 4038 48.89 +1 4929085..4930704 + 539 157963868 - Spea_4057 - AbgT putative transporter 4039 47.53 0 4931239..4932858 + 539 157963869 - Spea_4058 - AbgT putative transporter 4040 48.75 +1 4933159..4933716 + 185 157963870 - Spea_4059 - phosphodiesterase 4041 47.39 0 4934084..4937242 - 1052 157963871 - Spea_4060 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 4042 45.83 0 4937252..4938403 - 383 157963872 - Spea_4061 - RND family efflux transporter MFP subunit 4043 47.39 0 4938769..4939458 - 229 157963873 - Spea_4062 - 3-methyladenine DNA glycosylase 4044 45.73 0 4939601..4940302 + 233 157963874 - Spea_4063 - glutathione S-transferase domain-containing protein 4045 43.63 0 4940533..4941105 - 190 157963875 - Spea_4064 - hypothetical protein 4046 50.34 +1 4941228..4943267 - 679 157963876 - Spea_4065 - oligopeptidase A 4047 45.09 0 4943450..4944325 + 291 157963877 - Spea_4066 - hypothetical protein 4048 52.38 +2 4944484..4944966 + 160 157963878 - Spea_4067 - hypothetical protein 4049 50.29 +1 4945269..4946624 + 451 157963879 - Spea_4068 - glutathione reductase 4050 41.41 -1 4946724..4947107 + 127 157963880 - Spea_4069 - transposase 4051 43.62 0 4947224..4947952 + 242 157963881 - Spea_4070 - integrase catalytic region 4052 45.06 0 4948040..4949992 - 650 157963882 - Spea_4071 - choline/carnitine/betaine transporter 4053 47.87 0 4950560..4951660 - 366 157963883 - Spea_4072 - NADH:flavin oxidoreductase/NADH oxidase 4054 47.64 0 4952031..4953134 + 367 157963884 - Spea_4073 - hypothetical protein 4055 48.40 0 4954050..4955204 - 384 157963885 - Spea_4074 - amidohydrolase 4056 45.69 0 4955287..4956273 - 328 157963886 - Spea_4075 - hypothetical protein 4057 47.17 0 4956313..4957143 - 276 157963887 - Spea_4076 - Asp/Glu racemase 4058 48.16 0 4957158..4958324 - 388 157963888 - Spea_4077 - peptidase M24 4059 42.29 0 4958664..4959344 + 226 157963889 - Spea_4078 - YheO domain-containing protein 4060 44.53 0 4959364..4959747 + 127 157963890 - Spea_4079 - putative endoribonuclease L-PSP 4061 47.24 0 4959855..4961033 + 392 157963891 - Spea_4080 - diaminopropionate ammonia-lyase 4062 49.03 +1 4961634..4962614 + 326 157963892 - Spea_4081 - hypothetical protein 4063 47.48 0 4963119..4963832 - 237 157963893 - Spea_4082 - ThiJ/PfpI domain-containing protein 4064 46.08 0 4964040..4965224 - 394 157963894 - Spea_4083 - metal dependent phosphohydrolase 4065 45.85 0 4965704..4966462 - 252 157963895 - Spea_4084 - hypothetical protein 4066 45.25 0 4966547..4967083 - 178 157963896 - Spea_4085 - hypothetical protein 4067 46.73 0 4967080..4967751 - 223 157963897 - Spea_4086 - cobalt transport protein 4068 47.62 0 4967741..4969105 - 454 157963898 - Spea_4087 - ABC transporter related 4069 42.86 0 4969123..4971075 - 650 157963899 - Spea_4088 - TonB-dependent receptor 4070 49.37 +1 4971514..4972872 + 452 157963900 - Spea_4089 - isochorismate synthase 4071 44.55 0 4973090..4973749 + 219 157963901 - Spea_4090 - hypothetical protein 4072 44.01 0 4973872..4974330 + 152 157963902 - Spea_4091 - GCN5-related N-acetyltransferase 4073 48.75 +1 4975105..4977225 - 706 157963903 - Spea_4092 - histidine kinase 4074 48.11 0 4977275..4978648 - 457 157963904 - Spea_4093 - two component, sigma54 specific, Fis family transcriptional regulator 4075 44.65 0 4978937..4979749 + 270 157963905 - Spea_4094 - extracellular solute-binding protein 4076 49.01 +1 4979746..4980453 + 235 157963906 - Spea_4095 - binding-protein-dependent transport systems inner membrane component 4077 45.25 0 4980459..4981205 + 248 157963907 - Spea_4096 - ABC transporter related 4078 46.10 0 4981258..4981860 + 200 157963908 - Spea_4097 - molybdopterin-guanine dinucleotide biosynthesis protein A 4079 50.56 +1 4981869..4983668 + 599 157963909 - Spea_4098 - molybdopterin-guanine dinucleotide biosynthesis protein B 4080 49.65 +1 4983689..4984675 + 328 157963910 - Spea_4099 - molybdenum cofactor biosynthesis protein A 4081 37.61 -2 4984821..4985825 - 334 157963911 - Spea_4100 - membrane-fusion protein 4082 49.24 +1 4986700..4988730 - 676 157963912 - Spea_4101 - Ig domain-containing protein 4083 39.53 -1 4989087..4989473 - 128 157963913 - Spea_4102 - hypothetical protein 4084 51.63 +1 4990869..4991327 + 152 157963914 - Spea_4103 - hypothetical protein 4085 50.25 +1 4991397..4992212 + 271 157963915 - Spea_4104 - formamidopyrimidine-DNA glycosylase 4086 45.05 0 4992251..4992916 - 221 157963916 - Spea_4105 - SNARE associated Golgi protein 4087 48.53 +1 4993008..4994507 - 499 157963917 - Spea_4106 - hypothetical protein 4088 45.00 0 4994514..4994993 - 159 157963918 - Spea_4107 - phosphopantetheine adenylyltransferase 4089 49.57 +1 4995189..4995878 - 229 157963919 - Spea_4108 - pseudouridine synthase Rlu family protein 4090 47.98 0 4995928..4997265 - 445 157963920 - Spea_4109 - histidine kinase 4091 46.17 0 4997234..4997911 - 225 157963921 - Spea_4110 - two component transcriptional regulator 4092 41.38 -1 4997915..4998436 - 173 157963922 - Spea_4111 - hypothetical protein 4093 43.30 0 4998479..4998829 - 116 157963923 - Spea_4112 - hypothetical protein 4094 50.59 +1 4998961..5000067 - 368 157963924 - Spea_4113 - ABC transporter related 4095 51.40 +1 5000048..5000728 - 226 157963925 - Spea_4114 - molybdate ABC transporter, inner membrane subunit 4096 47.82 0 5000728..5001507 - 259 157963926 - Spea_4115 - molybdenum ABC transporter, periplasmic molybdate-binding protein 4097 50.34 +1 5001551..5001997 - 148 157963927 - Spea_4116 - molybdopterin biosynthesis MoaE protein 4098 45.63 0 5001999..5002250 - 83 157963928 - Spea_4117 - molybdopterin converting factor, subunit 1 4099 45.67 0 5002259..5002801 - 180 157963929 - Spea_4118 - molybdenum cofactor biosynthesis protein C 4100 44.76 0 5002816..5003340 - 174 157963930 - Spea_4119 - molybdenum cofactor biosynthesis protein B 4101 47.20 0 5003438..5004418 - 326 157963931 - Spea_4120 - molybdenum cofactor biosynthesis protein A 4102 50.06 +1 5004800..5006449 + 549 157963932 - Spea_4121 - electron-transferring-flavoprotein dehydrogenase 4103 41.31 -1 5006569..5006919 - 116 157963933 - Spea_4122 - hypothetical protein 4104 48.93 +1 5006963..5007661 - 232 157963934 - Spea_4123 - MOSC domain-containing protein 4105 44.51 0 5007771..5009228 - 485 157963935 - Spea_4124 - diguanylate cyclase 4106 50.53 +1 5009988..5010830 - 280 157963936 - Spea_4125 - ribokinase-like domain-containing protein 4107 45.00 0 5011375..5012703 - 442 157963937 - Spea_4126 - coproporphyrinogen III oxidase 4108 44.82 0 5012969..5013952 - 327 157963938 - Spea_4127 - formate dehydrogenase, gamma subunit 4109 48.77 +1 5014033..5014602 - 189 157963939 - Spea_4128 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4110 48.02 0 5014632..5017505 - 957 157963940 - Spea_4129 - molybdopterin oxidoreductase 4111 44.95 0 5017524..5017721 - 65 157963941 - Spea_4130 - formate dehydrogenase region TAT target 4112 46.48 0 5019053..5020033 - 326 157963942 - Spea_4131 - formate dehydrogenase, gamma subunit 4113 47.02 0 5020109..5020678 - 189 157963943 - Spea_4132 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4114 48.81 +1 5020708..5023563 - 951 157963944 - Spea_4133 - molybdopterin oxidoreductase 4115 45.45 0 5023582..5023779 - 65 157963945 - Spea_4134 - formate dehydrogenase region TAT target 4116 45.24 0 5024654..5025661 - 335 157963946 - Spea_4135 - formate dehydrogenase, gamma subunit 4117 50.51 +1 5025715..5026302 - 195 157963947 - Spea_4136 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4118 48.00 0 5026329..5029178 - 949 157963948 - Spea_4137 - molybdopterin oxidoreductase 4119 51.24 +1 5029194..5029394 - 66 157963949 - Spea_4138 - formate dehydrogenase region TAT target 4120 46.52 0 5029569..5030243 - 224 157963950 - Spea_4139 - cytoplasmic chaperone TorD family protein 4121 46.90 0 5030254..5031933 - 559 157963951 - Spea_4140 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4122 44.85 0 5032081..5032731 - 216 157963952 - Spea_4141 - hypothetical protein 4123 46.79 0 5032728..5033195 - 155 157963953 - Spea_4142 - hypothetical protein 4124 44.48 0 5033480..5034322 + 280 157963954 - Spea_4143 - formate dehydrogenase subunit FdhD 4125 50.33 +1 5034370..5035275 + 301 157963955 - Spea_4144 - DNA binding domain-containing protein 4126 46.24 0 5035287..5035658 - 123 157963956 - Spea_4145 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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