IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4021	 46.71	0	4907056..4907997	+	313	157963851	-	Spea_4040	-	electron transfer flavoprotein alpha subunit
4022	 43.41	0	4908089..4909378	+	429	157963852	-	Spea_4041	-	FAD dependent oxidoreductase
4023	 40.28	-1	4909375..4909662	+	95	157963853	-	Spea_4042	-	putative ferredoxin
4024	 43.56	0	4909938..4911296	+	452	157963854	-	Spea_4043	-	general substrate transporter
4025	 42.02	0	4911516..4912655	+	379	157963855	-	Spea_4044	-	hypothetical protein
4026	 50.04	+1	4913065..4914483	+	472	157963856	-	Spea_4045	-	magnesium transporter
4027	 40.87	-1	4914603..4915862	-	419	157963857	-	Spea_4046	-	hypothetical protein
4028	 49.61	+1	4916115..4916876	-	253	157963858	-	Spea_4047	-	hypothetical protein
4029	 47.06	0	4917157..4919451	+	764	157963859	-	Spea_4048	-	hypothetical protein
4030	 45.81	0	4919772..4921013	+	413	157963860	-	Spea_4049	-	transcriptional regulator, CadC
4031	 47.09	0	4921070..4921912	+	280	157963861	-	Spea_4050	-	hypothetical protein
4032