IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4016	 41.38	-1	4899535..4901088	-	517	157963846	-	Spea_4035	-	putative crotonobetaine/carnitine-CoA ligase
4017	 45.53	0	4901099..4902361	-	420	157963847	-	Spea_4036	-	crotonobetainyl-CoA:carnitine CoA-transferase
4018	 48.11	0	4902556..4903692	-	378	157963848	-	Spea_4037	-	crotonobetainyl-CoA dehydrogenase
4019	 44.74	0	4903734..4905293	-	519	157963849	-	Spea_4038	-	L-carnitine/gamma-butyrobetaine antiporter
4020	 44.83	0	4906269..4907042	+	257	157963850	-	Spea_4039	-	putative electron transfer flavoprotein FixA
4021	 46.71	0	4907056..4907997	+	313	157963851	-	Spea_4040	-	electron transfer flavoprotein alpha subunit
4022	 43.41	0	4908089..4909378	+	429	157963852	-	Spea_4041	-	FAD dependent oxidoreductase
4023	 40.28	-1	4909375..4909662	+	95	157963853	-	Spea_4042	-	putative ferredoxin
4024	 43.56	0	4909938..4911296	+	452	157963854	-	Spea_4043	-	general substrate transporter
4025	 42.02	0	4911516..4912655	+	379	157963855	-	Spea_4044	-	hypothetical protein
4026	 50.04	+1	4913065..4914483	+	472