IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4012	 47.82	0	4895880..4896818	-	312	157963842	-	Spea_4031	-	alpha/beta hydrolase domain-containing protein
4013	 49.48	+1	4896994..4897662	-	222	157963843	-	Spea_4032	-	carnitine operon protein CaiE
4014	 48.94	+1	4897742..4898593	-	283	157963844	-	Spea_4033	-	3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase
4015	 49.87	+1	4898687..4899472	-	261	157963845	-	Spea_4034	-	carnitinyl-CoA dehydratase
4016	 41.38	-1	4899535..4901088	-	517	157963846	-	Spea_4035	-	putative crotonobetaine/carnitine-CoA ligase
4017	 45.53	0	4901099..4902361	-	420	157963847	-	Spea_4036	-	crotonobetainyl-CoA:carnitine CoA-transferase
4018	 48.11	0	4902556..4903692	-	378	157963848	-	Spea_4037	-	crotonobetainyl-CoA dehydrogenase
4019	 44.74	0	4903734..4905293	-	519	157963849	-	Spea_4038	-	L-carnitine/gamma-butyrobetaine antiporter
4020	 44.83	0	4906269..4907042	+	257	157963850	-	Spea_4039	-	putative electron transfer flavoprotein FixA
4021	 46.71	0	4907056..4907997	+	313	157963851	-	Spea_4040	-	electron transfer flavoprotein alpha subunit
4022	 43.41	0	4908089..4909378	+	429