IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4008	 43.44	0	4891536..4893296	+	586	157963838	-	Spea_4027	-	arylsulfotransferase
4009	 42.65	0	4893365..4893976	+	203	157963839	-	Spea_4028	-	DSBA oxidoreductase
4010	 47.60	0	4893986..4894609	+	207	157963840	-	Spea_4029	-	disulphide bond formation protein DsbB
4011	 46.35	0	4894801..4895691	-	296	157963841	-	Spea_4030	-	LysR family transcriptional regulator
4012	 47.82	0	4895880..4896818	-	312	157963842	-	Spea_4031	-	alpha/beta hydrolase domain-containing protein
4013	 49.48	+1	4896994..4897662	-	222	157963843	-	Spea_4032	-	carnitine operon protein CaiE
4014	 48.94	+1	4897742..4898593	-	283	157963844	-	Spea_4033	-	3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase
4015	 49.87	+1	4898687..4899472	-	261	157963845	-	Spea_4034	-	carnitinyl-CoA dehydratase
4016	 41.38	-1	4899535..4901088	-	517	157963846	-	Spea_4035	-	putative crotonobetaine/carnitine-CoA ligase
4017	 45.53	0	4901099..4902361	-	420	157963847	-	Spea_4036	-	crotonobetainyl-CoA:carnitine CoA-transferase
4018	 48.11	0	4902556..4903692	-	378