IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
357	 45.84	0	409908..411026	-	372	157960187	-	Spea_0358	-	RND family efflux transporter MFP subunit
358	 44.12	0	411042..411653	-	203	157960188	-	Spea_0359	-	TetR family transcriptional regulator
359	 46.97	0	411859..413874	+	671	157960189	-	Spea_0360	-	ATP-dependent DNA helicase Rep
360	 42.75	0	413908..416529	-	873	157960190	-	Spea_0361	-	diguanylate cyclase/phosphodiesterase with GAF sensor
361	 45.10	0	417531..419450	-	639	157960191	-	Spea_0362	-	diguanylate cyclase/phosphodiesterase
362	 40.25	-1	419458..420165	-	235	157960192	-	Spea_0363	-	hypothetical protein
363	 44.88	0	420184..420789	-	201	157960193	-	Spea_0364	-	OmpA/MotB domain-containing protein
364	 47.62	0	420786..422213	-	475	157960194	-	Spea_0365	-	TolC family type I secretion outer membrane protein
365	 46.20	0	422248..423630	-	460	157960195	-	Spea_0366	-	HlyD family type I secretion membrane fusion protein
366	 47.98	0	423627..425804	-	725	157960196	-	Spea_0367	-	ABC transporter related
367	 45.87	0	425898..442232	-	5444