IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
351	 48.15	0	401814..403190	-	458	157960181	-	Spea_0352	-	sodium:neurotransmitter symporter
352	 47.03	0	403619..404107	-	162	157960182	-	Spea_0353	-	AsnC family transcriptional regulator
353	 49.54	+1	404214..404966	-	250	157960183	-	Spea_0354	-	phosphoesterase PA-phosphatase related
354	 44.52	0	405421..406278	+	285	157960184	-	Spea_0355	-	hypothetical protein
355	 43.14	0	406354..406608	-	84	157960185	-	Spea_0356	-	hypothetical protein
356	 47.82	0	406800..409892	-	1030	157960186	-	Spea_0357	-	acriflavin resistance protein
357	 45.84	0	409908..411026	-	372	157960187	-	Spea_0358	-	RND family efflux transporter MFP subunit
358	 44.12	0	411042..411653	-	203	157960188	-	Spea_0359	-	TetR family transcriptional regulator
359	 46.97	0	411859..413874	+	671	157960189	-	Spea_0360	-	ATP-dependent DNA helicase Rep
360	 42.75	0	413908..416529	-	873	157960190	-	Spea_0361	-	diguanylate cyclase/phosphodiesterase with GAF sensor
361	 45.10	0	417531..419450	-	639	157960191