IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3934	 45.73	0	4806122..4808266	+	714	157963764	-	Spea_3953	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
3935	 46.88	0	4808529..4809200	-	223	157963765	-	Spea_3954	-	DTW domain-containing protein
3936	 40.51	-1	4809422..4810438	+	338	157963766	-	Spea_3955	-	hypothetical protein
3937	 50.29	+1	4810554..4811756	-	400	157963767	-	Spea_3956	-	Bcr/CflA subfamily drug resistance transporter
3938	 50.26	+1	4811857..4812825	+	322	157963768	-	Spea_3957	-	LysR family transcriptional regulator
3939	 44.24	0	4812990..4813319	+	109	157963769	-	Spea_3958	-	hypothetical protein
3940	 45.23	0	4813337..4814605	-	422	157963770	-	Spea_3959	-	hypothetical protein
3941	 49.72	+1	4814948..4816369	-	473	157963771	-	Spea_3960	-	Sel1 domain-containing protein
3942	 43.67	0	4816487..4817221	-	244	157963772	-	Spea_3961	-	hypothetical protein
3943	 47.21	0	4817405..4817923	+	172	157963773	-	Spea_3962	-	hypothetical protein
3944	 42.95	0	4818028..4818495	+	155	157