IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3925	 48.35	0	4795292..4796170	+	292	157963755	-	Spea_3944	-	radical SAM domain-containing protein
3926	 49.47	+1	4798113..4799060	-	315	157963756	-	Spea_3945	-	LysR family transcriptional regulator
3927	 48.05	0	4799324..4799785	+	153	157963757	-	Spea_3946	-	RNA methyltransferase
3928	 49.24	+1	4799885..4801330	-	481	157963758	-	Spea_3947	-	peptidase M16 domain-containing protein
3929	 49.70	+1	4801327..4802658	-	443	157963759	-	Spea_3948	-	peptidase M16 domain-containing protein
3930	 44.99	0	4802932..4803600	+	222	157963760	-	Spea_3949	-	type IV pilus assembly PilZ
3931	 45.02	0	4803675..4804667	-	330	157963761	-	Spea_3950	-	hypothetical protein
3932	 44.97	0	4804719..4805354	-	211	157963762	-	Spea_3951	-	methyltransferase type 11
3933	 47.62	0	4805393..4805707	-	104	157963763	-	Spea_3952	-	hypothetical protein
3934	 45.73	0	4806122..4808266	+	714	157963764	-	Spea_3953	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
3935	 46.88	0	4808529..4809200	-	223