version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3898 46.00 0 4766310..4767572 + 420 157963728 - Spea_3917 - sodium:dicarboxylate symporter 3899 40.49 -1 4767795..4768199 + 134 157963729 - Spea_3918 - hypothetical protein 3900 46.03 0 4768245..4768559 + 104 157963730 - Spea_3919 - XRE family transcriptional regulator 3901 47.87 0 4768626..4769636 - 336 157963731 - Spea_3920 - BNR repeat-containing glycosyl hydrolase 3902 40.85 -1 4769883..4770188 + 101 157963732 - Spea_3921 - hypothetical protein 3903 49.10 +1 4770233..4771348 - 371 157963733 - Spea_3922 - aminotransferase class V 3904 49.36 +1 4771353..4772525 - 390 157963734 - Spea_3923 - hypothetical protein 3905 47.46 0 4772696..4773148 + 150 157963735 - Spea_3924 - AsnC family transcriptional regulator 3906 47.93 0 4773308..4774465 + 385 157963736 - Spea_3925 - iron-containing alcohol dehydrogenase 3907 48.82 +1 4774570..4775247 + 225 157963737 - Spea_3926 - ThiJ/PfpI domain-containing protein 3908 45.58 0 4775404..4776048 - 214 157963738 - Spea_3927 - hypothetical protein 3909 45.97 0 4776409..4776954 + 181 157963739 - Spea_3928 - hypothetical protein 3910 49.28 +1 4777107..4778147 + 346 157963740 - Spea_3929 - signal transduction histidine kinase, nitrogen specific, NtrB 3911 52.27 +2 4778165..4779574 + 469 157963741 - Spea_3930 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 3912 49.66 +1 4779643..4780512 - 289 157963742 - Spea_3931 - cation diffusion facilitator family transporter 3913 44.72 0 4780672..4781154 - 160 157963743 - Spea_3932 - protein of unknown function Spy-related 3914 48.39 0 4781386..4782069 + 227 157963744 - Spea_3933 - two component transcriptional regulator 3915 48.58 +1 4782070..4783446 + 458 157963745 - Spea_3934 - histidine kinase 3916 52.78 +2 4783462..4784109 - 215 157963746 - Spea_3935 - regulatory protein TetR 3917 47.30 0 4784231..4785118 + 295 157963747 - Spea_3936 - LysR family transcriptional regulator 3918 43.21 0 4785588..4786832 - 414 157963748 - Spea_3937 - hypothetical protein 3919 41.81 -1 4787112..4787465 - 117 157963749 - Spea_3938 - tetraheme cytochrome c 3920 47.73 0 4787494..4789014 - 506 157963750 - Spea_3939 - flavocytochrome c 3921 48.34 0 4789486..4790418 + 310 157963751 - Spea_3940 - LysR family transcriptional regulator 3922 51.78 +2 4790736..4791716 - 326 157963752 - Spea_3941 - quinone oxidoreductase putative YhdH/YhfP 3923 50.82 +1 4791974..4793494 + 506 157963753 - Spea_3942 - aldehyde dehydrogenase 3924 48.13 0 4793708..4795261 + 517 157963754 - Spea_3943 - hypothetical protein 3925 48.35 0 4795292..4796170 + 292 157963755 - Spea_3944 - radical SAM domain-containing protein 3926 49.47 +1 4798113..4799060 - 315 157963756 - Spea_3945 - LysR family transcriptional regulator 3927 48.05 0 4799324..4799785 + 153 157963757 - Spea_3946 - RNA methyltransferase 3928 49.24 +1 4799885..4801330 - 481 157963758 - Spea_3947 - peptidase M16 domain-containing protein 3929 49.70 +1 4801327..4802658 - 443 157963759 - Spea_3948 - peptidase M16 domain-containing protein 3930 44.99 0 4802932..4803600 + 222 157963760 - Spea_3949 - type IV pilus assembly PilZ 3931 45.02 0 4803675..4804667 - 330 157963761 - Spea_3950 - hypothetical protein 3932 44.97 0 4804719..4805354 - 211 157963762 - Spea_3951 - methyltransferase type 11 3933 47.62 0 4805393..4805707 - 104 157963763 - Spea_3952 - hypothetical protein 3934 45.73 0 4806122..4808266 + 714 157963764 - Spea_3953 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3935 46.88 0 4808529..4809200 - 223 157963765 - Spea_3954 - DTW domain-containing protein 3936 40.51 -1 4809422..4810438 + 338 157963766 - Spea_3955 - hypothetical protein 3937 50.29 +1 4810554..4811756 - 400 157963767 - Spea_3956 - Bcr/CflA subfamily drug resistance transporter 3938 50.26 +1 4811857..4812825 + 322 157963768 - Spea_3957 - LysR family transcriptional regulator 3939 44.24 0 4812990..4813319 + 109 157963769 - Spea_3958 - hypothetical protein 3940 45.23 0 4813337..4814605 - 422 157963770 - Spea_3959 - hypothetical protein 3941 49.72 +1 4814948..4816369 - 473 157963771 - Spea_3960 - Sel1 domain-containing protein 3942 43.67 0 4816487..4817221 - 244 157963772 - Spea_3961 - hypothetical protein 3943 47.21 0 4817405..4817923 + 172 157963773 - Spea_3962 - hypothetical protein 3944 42.95 0 4818028..4818495 + 155 157963774 - Spea_3963 - hypothetical protein 3945 44.67 0 4819023..4819313 - 96 157963775 - Spea_3964 - hypothetical protein 3946 45.33 0 4819335..4820276 - 313 157963776 - Spea_3965 - polysulphide reductase NrfD 3947 45.76 0 4820273..4820956 - 227 157963777 - Spea_3966 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3948 42.25 0 4820971..4821441 - 156 157963778 - Spea_3967 - formate-dependent nitrite reductase 3949 36.18 -2 4821524..4822015 - 163 157963779 - Spea_3968 - hypothetical protein 3950 36.44 -2 4822559..4823524 + 321 157963780 - Spea_3969 - LysR family transcriptional regulator 3951 39.31 -1 4823602..4824555 - 317 157963781 - Spea_3970 - LysR family transcriptional regulator 3952 49.25 +1 4824773..4826500 + 575 157963782 - Spea_3971 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 3953 48.85 +1 4826500..4827285 + 261 157963783 - Spea_3972 - alpha/beta hydrolase fold 3954 48.88 +1 4827341..4828414 + 357 157963784 - Spea_3973 - O-succinylbenzoate synthase 3955 51.20 +1 4828495..4829949 + 484 157963785 - Spea_3974 - O-succinylbenzoate-CoA ligase 3956 41.84 -1 4830318..4830599 - 93 157963786 - Spea_3975 - hypothetical protein 3957 42.08 0 4831284..4832300 + 338 157963787 - Spea_3976 - transposase IS116/IS110/IS902 family protein 3958 44.99 0 4832882..4833739 - 285 157963788 - Spea_3977 - RNA polymerase factor sigma-32 3959 48.14 0 4833973..4834938 - 321 157963789 - Spea_3978 - hypothetical protein 3960 47.76 0 4834948..4835640 - 230 157963790 - Spea_3979 - cell division ATP-binding protein FtsE 3961 49.48 +1 4835734..4837665 - 643 157963791 - Spea_3980 - signal recognition particle-docking protein FtsY 3962 47.46 0 4837891..4838520 + 209 157963792 - Spea_3981 - putative methyltransferase 3963 39.01 -1 4838521..4838802 + 93 157963793 - Spea_3982 - hypothetical protein 3964 43.26 0 4839432..4839995 - 187 157963794 - Spea_3983 - NapC/NirT cytochrome c domain-containing protein 3965 44.76 0 4840385..4840813 + 142 157963795 - Spea_3984 - hypothetical protein 3966 41.90 0 4841018..4841437 + 139 157963796 - Spea_3985 - hypothetical protein 3967 45.56 0 4841556..4841972 + 138 157963797 - Spea_3986 - hypothetical protein 3968 45.04 0 4842116..4842730 + 204 157963798 - Spea_3987 - hypothetical protein 3969 50.65 +1 4842755..4844677 + 640 157963799 - Spea_3988 - RND family efflux transporter MFP subunit 3970 50.83 +1 4844691..4847828 + 1045 157963800 - Spea_3989 - CzcA family heavy metal efflux protein 3971 50.83 +1 4848365..4849147 - 260 157963801 - Spea_3990 - glyoxalase/bleomycin resistance protein/dioxygenase 3972 44.08 0 4849339..4850529 + 396 157963802 - Spea_3991 - diguanylate cyclase 3973 48.86 +1 4850613..4851836 - 407 157963803 - Spea_3992 - secretion protein HlyD family protein 3974 50.29 +1 4851829..4852176 - 115 157963804 - Spea_3993 - major facilitator superfamily permease 3975 45.97 0 4852314..4853342 + 342 157963805 - Spea_3994 - AraC family transcriptional regulator 3976 47.73 0 4853380..4854636 - 418 157963806 - Spea_3995 - aromatic amino acid transporter 3977 46.78 0 4854636..4857059 - 807 157963807 - Spea_3996 - glycerol-3-phosphate acyltransferase 3978 45.89 0 4857468..4858088 + 206 157963808 - Spea_3997 - LexA repressor 3979 46.99 0 4858085..4858633 + 182 157963809 - Spea_3998 - hypothetical protein 3980 47.94 0 4859111..4860685 + 524 157963810 - Spea_3999 - cytochrome c oxidase subunit II 3981 48.97 +1 4860695..4862299 + 534 157963811 - Spea_4000 - cytochrome c oxidase subunit I type 3982 44.79 0 4862302..4862877 + 191 157963812 - Spea_4001 - cytochrome C oxidase assembly protein 3983 46.03 0 4862874..4863755 + 293 157963813 - Spea_4002 - cytochrome c oxidase subunit III 3984 44.44 0 4863801..4864727 + 308 157963814 - Spea_4003 - hypothetical protein 3985 45.12 0 4864923..4865465 + 180 157963815 - Spea_4004 - hypothetical protein 3986 48.27 0 4865611..4866594 + 327 157963816 - Spea_4005 - cytochrome oxidase assembly 3987 48.12 0 4866661..4867566 + 301 157963817 - Spea_4006 - protoheme IX farnesyltransferase 3988 48.41 0 4867601..4868230 + 209 157963818 - Spea_4007 - electron transport protein SCO1/SenC 3989 47.85 0 4868294..4869340 - 348 157963819 - Spea_4008 - polysaccharide deacetylase 3990 47.45 0 4869359..4870690 + 443 157963820 - Spea_4009 - MATE efflux family protein 3991 43.87 0 4870783..4871361 - 192 157963821 - Spea_4010 - putative DNA uptake protein 3992 48.96 +1 4871560..4874112 + 850 157963822 - Spea_4011 - peptidase M14 carboxypeptidase A 3993 50.53 +1 4874147..4874896 - 249 157963823 - Spea_4012 - competence protein ComF 3994 52.34 +2 4874918..4875685 + 255 157963824 - Spea_4013 - bioH protein 3995 50.00 +1 4875808..4876305 + 165 157963825 - Spea_4014 - hypothetical protein 3996 48.51 +1 4876362..4878773 - 803 157963826 - Spea_4015 - RNA-binding S1 domain-containing protein 3997 45.62 0 4878864..4879343 - 159 157963827 - Spea_4016 - transcription elongation factor GreB 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0