IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3898	 46.00	0	4766310..4767572	+	420	157963728	-	Spea_3917	-	sodium:dicarboxylate symporter
3899	 40.49	-1	4767795..4768199	+	134	157963729	-	Spea_3918	-	hypothetical protein
3900	 46.03	0	4768245..4768559	+	104	157963730	-	Spea_3919	-	XRE family transcriptional regulator
3901	 47.87	0	4768626..4769636	-	336	157963731	-	Spea_3920	-	BNR repeat-containing glycosyl hydrolase
3902	 40.85	-1	4769883..4770188	+	101	157963732	-	Spea_3921	-	hypothetical protein
3903	 49.10	+1	4770233..4771348	-	371	157963733	-	Spea_3922	-	aminotransferase class V
3904	 49.36	+1	4771353..4772525	-	390	157963734	-	Spea_3923	-	hypothetical protein
3905	 47.46	0	4772696..4773148	+	150	157963735	-	Spea_3924	-	AsnC family transcriptional regulator
3906	 47.93	0	4773308..4774465	+	385	157963736	-	Spea_3925	-	iron-containing alcohol dehydrogenase
3907	 48.82	+1	4774570..4775247	+	225	157963737	-	Spea_3926	-	ThiJ/PfpI domain-containing protein
3908	 45.58	0	4775404..4776048	-	214	15796