IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3894	 47.57	0	4758754..4759617	-	287	157963724	-	Spea_3913	-	pyridoxal kinase
3895	 44.19	0	4759907..4761361	-	484	157963725	-	Spea_3914	-	disulphide bond formation protein DsbB
3896	 45.79	0	4762221..4764050	-	609	157963726	-	Spea_3915	-	GTP-binding protein TypA
3897	 45.46	0	4764725..4766134	+	469	157963727	-	Spea_3916	-	glutamine synthetase
3898	 46.00	0	4766310..4767572	+	420	157963728	-	Spea_3917	-	sodium:dicarboxylate symporter
3899	 40.49	-1	4767795..4768199	+	134	157963729	-	Spea_3918	-	hypothetical protein
3900	 46.03	0	4768245..4768559	+	104	157963730	-	Spea_3919	-	XRE family transcriptional regulator
3901	 47.87	0	4768626..4769636	-	336	157963731	-	Spea_3920	-	BNR repeat-containing glycosyl hydrolase
3902	 40.85	-1	4769883..4770188	+	101	157963732	-	Spea_3921	-	hypothetical protein
3903	 49.10	+1	4770233..4771348	-	371	157963733	-	Spea_3922	-	aminotransferase class V
3904	 49.36	+1	4771353..4772525	-	390	157963734	-	Spea_3923	-	hypotheti