IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3890	 46.33	0	4754959..4755981	-	340	157963720	-	Spea_3909	-	ribonuclease BN
3891	 45.61	0	4756115..4756342	+	75	157963721	-	Spea_3910	-	hypothetical protein
3892	 45.52	0	4756373..4757020	+	215	157963722	-	Spea_3911	-	hypothetical protein
3893	 50.12	+1	4757204..4758418	+	404	157963723	-	Spea_3912	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
3894	 47.57	0	4758754..4759617	-	287	157963724	-	Spea_3913	-	pyridoxal kinase
3895	 44.19	0	4759907..4761361	-	484	157963725	-	Spea_3914	-	disulphide bond formation protein DsbB
3896	 45.79	0	4762221..4764050	-	609	157963726	-	Spea_3915	-	GTP-binding protein TypA
3897	 45.46	0	4764725..4766134	+	469	157963727	-	Spea_3916	-	glutamine synthetase
3898	 46.00	0	4766310..4767572	+	420	157963728	-	Spea_3917	-	sodium:dicarboxylate symporter
3899	 40.49	-1	4767795..4768199	+	134	157963729	-	Spea_3918	-	hypothetical protein
3900	 46.03	0	4768245..4768559	+	104	157963730	-	Spea_3919	-	XRE family tra