IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3883	 49.72	+1	4749217..4749942	+	241	157963713	-	Spea_3902	-	3-ketoacyl-(acyl-carrier-protein) reductase
3884	 53.04	+2	4749939..4751186	+	415	157963714	-	Spea_3903	-	3-oxoacyl-(acyl carrier protein) synthase II
3885	 46.48	0	4751801..4752127	+	108	157963715	-	Spea_3904	-	rhodanese domain-containing protein
3886	 45.78	0	4752145..4752594	-	149	157963716	-	Spea_3905	-	thioesterase domain-containing protein
3887	 47.03	0	4752644..4753081	-	145	157963717	-	Spea_3906	-	D-tyrosyl-tRNA(Tyr) deacylase
3888	 43.99	0	4753426..4754007	-	193	157963718	-	Spea_3907	-	hypothetical protein
3889	 46.62	0	4754027..4754959	-	310	157963719	-	Spea_3908	-	prolyl aminopeptidase
3890	 46.33	0	4754959..4755981	-	340	157963720	-	Spea_3909	-	ribonuclease BN
3891	 45.61	0	4756115..4756342	+	75	157963721	-	Spea_3910	-	hypothetical protein
3892	 45.52	0	4756373..4757020	+	215	157963722	-	Spea_3911	-	hypothetical protein
3893	 50.12	+1	4757204..4758418	+	404	157963723	-	Spea_3