IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
345	 44.57	0	393081..393347	+	88	157960175	-	Spea_0346	-	amino acid-binding ACT domain-containing protein
346	 49.46	+1	393352..394281	+	309	157960176	-	Spea_0347	-	branched-chain amino acid aminotransferase
347	 51.89	+2	394506..396353	+	615	157960177	-	Spea_0348	-	dihydroxy-acid dehydratase
348	 49.97	+1	396382..397932	+	516	157960178	-	Spea_0349	-	threonine dehydratase
349	 50.84	+1	398269..399405	+	378	157960179	-	Spea_0350	-	Serine--pyruvate transaminase
350	 51.16	+1	399637..401622	-	661	157960180	-	Spea_0351	-	TonB-dependent copper receptor
351	 48.15	0	401814..403190	-	458	157960181	-	Spea_0352	-	sodium:neurotransmitter symporter
352	 47.03	0	403619..404107	-	162	157960182	-	Spea_0353	-	AsnC family transcriptional regulator
353	 49.54	+1	404214..404966	-	250	157960183	-	Spea_0354	-	phosphoesterase PA-phosphatase related
354	 44.52	0	405421..406278	+	285	157960184	-	Spea_0355	-	hypothetical protein
355	 43.14	0	406354..406608	-	84	157960185	-	Spea_0356