IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3875	 50.80	+1	4740218..4741780	+	520	157963705	-	Spea_3894	-	histidine ammonia-lyase
3876	 46.89	0	4741780..4742229	+	149	157963706	-	Spea_3895	-	4-hydroxybenzoyl-CoA thioesterase
3877	 46.59	0	4742226..4742972	+	248	157963707	-	Spea_3896	-	outer membrane lipoprotein carrier protein LolA
3878	 49.90	+1	4742972..4745386	+	804	157963708	-	Spea_3897	-	hypothetical protein
3879	 49.77	+1	4745376..4746665	+	429	157963709	-	Spea_3898	-	tryptophan halogenase
3880	 47.99	0	4746653..4747348	+	231	157963710	-	Spea_3899	-	hypothetical protein
3881	 50.96	+1	4747371..4748669	+	432	157963711	-	Spea_3900	-	3-oxoacyl-(acyl carrier protein) synthase I
3882	 47.80	0	4748662..4749138	+	158	157963712	-	Spea_3901	-	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
3883	 49.72	+1	4749217..4749942	+	241	157963713	-	Spea_3902	-	3-ketoacyl-(acyl-carrier-protein) reductase
3884	 53.04	+2	4749939..4751186	+	415	157963714	-	Spea_3903	-	3-oxoacyl-(acyl carrier protein) synthase II
3885	 46.48	0	4751801..4752127	+	108