IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3871	 47.36	0	4736157..4736705	+	182	157963701	-	Spea_3890	-	hypothetical protein
3872	 51.09	+1	4736702..4738081	+	459	157963702	-	Spea_3891	-	hypothetical protein
3873	 48.06	0	4738078..4738464	+	128	157963703	-	Spea_3892	-	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
3874	 49.54	+1	4738464..4740221	+	585	157963704	-	Spea_3893	-	glycosyl transferase family protein
3875	 50.80	+1	4740218..4741780	+	520	157963705	-	Spea_3894	-	histidine ammonia-lyase
3876	 46.89	0	4741780..4742229	+	149	157963706	-	Spea_3895	-	4-hydroxybenzoyl-CoA thioesterase
3877	 46.59	0	4742226..4742972	+	248	157963707	-	Spea_3896	-	outer membrane lipoprotein carrier protein LolA
3878	 49.90	+1	4742972..4745386	+	804	157963708	-	Spea_3897	-	hypothetical protein
3879	 49.77	+1	4745376..4746665	+	429	157963709	-	Spea_3898	-	tryptophan halogenase
3880	 47.99	0	4746653..4747348	+	231	157963710	-	Spea_3899	-	hypothetical protein
3881	 50.96	+1	4747371..4748669	+	432	157