IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3864	 46.86	0	4729636..4730559	+	307	157963694	-	Spea_3883	-	CaCA family Na(+)/Ca(+) antiporter
3865	 50.45	+1	4730762..4732852	+	696	157963695	-	Spea_3884	-	ATP-dependent DNA helicase RecG
3866	 48.96	+1	4732994..4733857	+	287	157963696	-	Spea_3885	-	hypothetical protein
3867	 50.14	+1	4734113..4734838	+	241	157963697	-	Spea_3886	-	hypothetical protein
3868	 48.84	+1	4734831..4735649	+	272	157963698	-	Spea_3887	-	phospholipid/glycerol acyltransferase
3869	 41.96	0	4735646..4735900	+	84	157963699	-	Spea_3888	-	acyl carrier protein, putative
3870	 42.17	0	4735909..4736157	+	82	157963700	-	Spea_3889	-	acyl carrier protein
3871	 47.36	0	4736157..4736705	+	182	157963701	-	Spea_3890	-	hypothetical protein
3872	 51.09	+1	4736702..4738081	+	459	157963702	-	Spea_3891	-	hypothetical protein
3873	 48.06	0	4738078..4738464	+	128	157963703	-	Spea_3892	-	Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
3874	 49.54	+1	4738464..4740221	+	585	157963704