IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3858	 48.03	0	4723151..4723783	+	210	157963688	-	Spea_3877	-	guanylate kinase
3859	 50.18	+1	4723845..4724129	+	94	157963689	-	Spea_3878	-	DNA-directed RNA polymerase subunit omega
3860	 49.10	+1	4724143..4726248	+	701	157963690	-	Spea_3879	-	bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
3861	 44.53	0	4726276..4726659	+	127	157963691	-	Spea_3880	-	putative endoribonuclease L-PSP
3862	 50.22	+1	4726801..4727487	+	228	157963692	-	Spea_3881	-	tRNA guanosine-2'-O-methyltransferase
3863	 46.86	0	4727800..4729455	+	551	157963693	-	Spea_3882	-	AMP-dependent synthetase and ligase
3864	 46.86	0	4729636..4730559	+	307	157963694	-	Spea_3883	-	CaCA family Na(+)/Ca(+) antiporter
3865	 50.45	+1	4730762..4732852	+	696	157963695	-	Spea_3884	-	ATP-dependent DNA helicase RecG
3866	 48.96	+1	4732994..4733857	+	287	157963696	-	Spea_3885	-	hypothetical protein
3867	 50.14	+1	4734113..4734838	+	241	157963697	-	Spea_3886	-	hypothetical protein
3868	 48.84	+1	4734831..4735649	+	272