IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3839	 50.45	+1	4688627..4689748	+	373	157963669	-	Spea_3858	-	mandelate racemase/muconate lactonizing protein
3840	 49.54	+1	4690418..4691281	+	287	157963670	-	Spea_3859	-	cytochrome C family protein
3841	 49.19	+1	4691291..4693012	+	573	157963671	-	Spea_3860	-	hypothetical protein
3842	 50.06	+1	4693023..4695473	+	816	157963672	-	Spea_3861	-	anaerobic dimethyl sulfoxide reductase subunit A
3843	 47.41	0	4695484..4696101	+	205	157963673	-	Spea_3862	-	dimethylsulfoxide reductase chain B
3844	 47.17	0	4696103..4698190	+	695	157963674	-	Spea_3863	-	hypothetical protein
3845	 44.61	0	4698245..4698865	+	206	157963675	-	Spea_3864	-	cytoplasmic chaperone TorD family protein
3846	 42.35	0	4698856..4699221	+	121	157963676	-	Spea_3865	-	hypothetical protein
3847	 42.14	0	4699284..4699976	-	230	157963677	-	Spea_3866	-	TetR family transcriptional regulator
3848	 49.54	+1	4700246..4701979	+	577	157963678	-	Spea_3867	-	OPT family oligopeptide transporter
3849	 46.50	0	4702004..4703218	-	404