IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3835	 45.96	0	4684001..4684903	-	300	157963665	-	Spea_3854	-	LysR family transcriptional regulator
3836	 48.56	+1	4684997..4686178	-	393	157963666	-	Spea_3855	-	D-galactarate dehydratase/Altronate hydrolase domain-containing protein
3837	 43.15	0	4686175..4686510	-	111	157963667	-	Spea_3856	-	D-galactarate dehydratase
3838	 45.90	0	4686977..4688623	+	548	157963668	-	Spea_3857	-	putative transporter
3839	 50.45	+1	4688627..4689748	+	373	157963669	-	Spea_3858	-	mandelate racemase/muconate lactonizing protein
3840	 49.54	+1	4690418..4691281	+	287	157963670	-	Spea_3859	-	cytochrome C family protein
3841	 49.19	+1	4691291..4693012	+	573	157963671	-	Spea_3860	-	hypothetical protein
3842	 50.06	+1	4693023..4695473	+	816	157963672	-	Spea_3861	-	anaerobic dimethyl sulfoxide reductase subunit A
3843	 47.41	0	4695484..4696101	+	205	157963673	-	Spea_3862	-	dimethylsulfoxide reductase chain B
3844	 47.17	0	4696103..4698190	+	695	157963674	-	Spea_3863	-	hypothetical protein
3845	 44.61	0	4698245..4698865	+	206