IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3826	 48.96	+1	4672541..4673404	+	287	157963656	-	Spea_3845	-	hypothetical protein
3827	 42.95	0	4673505..4674824	-	439	157963657	-	Spea_3846	-	HipA domain-containing protein
3828	 45.04	0	4674824..4675105	-	93	157963658	-	Spea_3847	-	helix-turn-helix domain-containing protein
3829	 49.24	+1	4675467..4675730	+	87	157963659	-	Spea_3848	-	hypothetical protein
3830	 41.72	-1	4675864..4677174	-	436	157963660	-	Spea_3849	-	hypothetical protein
3831	 46.43	0	4677747..4678586	+	279	157963661	-	Spea_3850	-	purine phosphorylase family 1
3832	 47.75	0	4678747..4680015	+	422	157963662	-	Spea_3851	-	nucleoside transporter
3833	 41.04	-1	4680141..4683110	-	989	157963663	-	Spea_3852	-	hypothetical protein
3834	 46.39	0	4683269..4683919	-	216	157963664	-	Spea_3853	-	GntR family transcriptional regulator
3835	 45.96	0	4684001..4684903	-	300	157963665	-	Spea_3854	-	LysR family transcriptional regulator
3836	 48.56	+1	4684997..4686178	-	393	157963666	-	Spea_3855	-	D