version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3819 51.59 +1 4664896..4666089 + 397 157963649 - Spea_3838 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3820 48.37 0 4666089..4666547 + 152 157963650 - Spea_3839 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3821 46.80 0 4666647..4667240 + 197 157963651 - Spea_3840 - nucleoid occlusion protein 3822 44.38 0 4667377..4669341 + 654 157963652 - Spea_3841 - peptidase S9 prolyl oligopeptidase 3823 48.64 +1 4669611..4670270 + 219 157963653 - Spea_3842 - GTP cyclohydrolase I 3824 47.51 0 4670794..4671435 - 213 157963654 - Spea_3843 - orotate phosphoribosyltransferase 3825 48.04 0 4671555..4672268 - 237 157963655 - Spea_3844 - ribonuclease PH 3826 48.96 +1 4672541..4673404 + 287 157963656 - Spea_3845 - hypothetical protein 3827 42.95 0 4673505..4674824 - 439 157963657 - Spea_3846 - HipA domain-containing protein 3828 45.04 0 4674824..4675105 - 93 157963658 - Spea_3847 - helix-turn-helix domain-containing protein 3829 49.24 +1 4675467..4675730 + 87 157963659 - Spea_3848 - hypothetical protein 3830 41.72 -1 4675864..4677174 - 436 157963660 - Spea_3849 - hypothetical protein 3831 46.43 0 4677747..4678586 + 279 157963661 - Spea_3850 - purine phosphorylase family 1 3832 47.75 0 4678747..4680015 + 422 157963662 - Spea_3851 - nucleoside transporter 3833 41.04 -1 4680141..4683110 - 989 157963663 - Spea_3852 - hypothetical protein 3834 46.39 0 4683269..4683919 - 216 157963664 - Spea_3853 - GntR family transcriptional regulator 3835 45.96 0 4684001..4684903 - 300 157963665 - Spea_3854 - LysR family transcriptional regulator 3836 48.56 +1 4684997..4686178 - 393 157963666 - Spea_3855 - D-galactarate dehydratase/Altronate hydrolase domain-containing protein 3837 43.15 0 4686175..4686510 - 111 157963667 - Spea_3856 - D-galactarate dehydratase 3838 45.90 0 4686977..4688623 + 548 157963668 - Spea_3857 - putative transporter 3839 50.45 +1 4688627..4689748 + 373 157963669 - Spea_3858 - mandelate racemase/muconate lactonizing protein 3840 49.54 +1 4690418..4691281 + 287 157963670 - Spea_3859 - cytochrome C family protein 3841 49.19 +1 4691291..4693012 + 573 157963671 - Spea_3860 - hypothetical protein 3842 50.06 +1 4693023..4695473 + 816 157963672 - Spea_3861 - anaerobic dimethyl sulfoxide reductase subunit A 3843 47.41 0 4695484..4696101 + 205 157963673 - Spea_3862 - dimethylsulfoxide reductase chain B 3844 47.17 0 4696103..4698190 + 695 157963674 - Spea_3863 - hypothetical protein 3845 44.61 0 4698245..4698865 + 206 157963675 - Spea_3864 - cytoplasmic chaperone TorD family protein 3846 42.35 0 4698856..4699221 + 121 157963676 - Spea_3865 - hypothetical protein 3847 42.14 0 4699284..4699976 - 230 157963677 - Spea_3866 - TetR family transcriptional regulator 3848 49.54 +1 4700246..4701979 + 577 157963678 - Spea_3867 - OPT family oligopeptide transporter 3849 46.50 0 4702004..4703218 - 404 157963679 - Spea_3868 - OmpA/MotB domain-containing protein 3850 49.24 +1 4703226..4714676 - 3816 157963680 - Spea_3869 - putative outer membrane adhesin like proteiin 3851 41.61 -1 4715208..4715642 - 144 157963681 - Spea_3870 - hypothetical protein 3852 49.13 +1 4715680..4717122 - 480 157963682 - Spea_3871 - pyridoxal-dependent decarboxylase 3853 48.57 +1 4717313..4718572 - 419 157963683 - Spea_3872 - amidohydrolase 3854 45.78 0 4718783..4719481 + 232 157963684 - Spea_3873 - hypothetical protein 3855 47.00 0 4719497..4720564 - 355 157963685 - Spea_3874 - aminoglycoside phosphotransferase 3856 50.22 +1 4720662..4721567 - 301 157963686 - Spea_3875 - hypothetical protein 3857 47.52 0 4721695..4722822 - 375 157963687 - Spea_3876 - hypothetical protein 3858 48.03 0 4723151..4723783 + 210 157963688 - Spea_3877 - guanylate kinase 3859 50.18 +1 4723845..4724129 + 94 157963689 - Spea_3878 - DNA-directed RNA polymerase subunit omega 3860 49.10 +1 4724143..4726248 + 701 157963690 - Spea_3879 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3861 44.53 0 4726276..4726659 + 127 157963691 - Spea_3880 - putative endoribonuclease L-PSP 3862 50.22 +1 4726801..4727487 + 228 157963692 - Spea_3881 - tRNA guanosine-2'-O-methyltransferase 3863 46.86 0 4727800..4729455 + 551 157963693 - Spea_3882 - AMP-dependent synthetase and ligase 3864 46.86 0 4729636..4730559 + 307 157963694 - Spea_3883 - CaCA family Na(+)/Ca(+) antiporter 3865 50.45 +1 4730762..4732852 + 696 157963695 - Spea_3884 - ATP-dependent DNA helicase RecG 3866 48.96 +1 4732994..4733857 + 287 157963696 - Spea_3885 - hypothetical protein 3867 50.14 +1 4734113..4734838 + 241 157963697 - Spea_3886 - hypothetical protein 3868 48.84 +1 4734831..4735649 + 272 157963698 - Spea_3887 - phospholipid/glycerol acyltransferase 3869 41.96 0 4735646..4735900 + 84 157963699 - Spea_3888 - acyl carrier protein, putative 3870 42.17 0 4735909..4736157 + 82 157963700 - Spea_3889 - acyl carrier protein 3871 47.36 0 4736157..4736705 + 182 157963701 - Spea_3890 - hypothetical protein 3872 51.09 +1 4736702..4738081 + 459 157963702 - Spea_3891 - hypothetical protein 3873 48.06 0 4738078..4738464 + 128 157963703 - Spea_3892 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3874 49.54 +1 4738464..4740221 + 585 157963704 - Spea_3893 - glycosyl transferase family protein 3875 50.80 +1 4740218..4741780 + 520 157963705 - Spea_3894 - histidine ammonia-lyase 3876 46.89 0 4741780..4742229 + 149 157963706 - Spea_3895 - 4-hydroxybenzoyl-CoA thioesterase 3877 46.59 0 4742226..4742972 + 248 157963707 - Spea_3896 - outer membrane lipoprotein carrier protein LolA 3878 49.90 +1 4742972..4745386 + 804 157963708 - Spea_3897 - hypothetical protein 3879 49.77 +1 4745376..4746665 + 429 157963709 - Spea_3898 - tryptophan halogenase 3880 47.99 0 4746653..4747348 + 231 157963710 - Spea_3899 - hypothetical protein 3881 50.96 +1 4747371..4748669 + 432 157963711 - Spea_3900 - 3-oxoacyl-(acyl carrier protein) synthase I 3882 47.80 0 4748662..4749138 + 158 157963712 - Spea_3901 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3883 49.72 +1 4749217..4749942 + 241 157963713 - Spea_3902 - 3-ketoacyl-(acyl-carrier-protein) reductase 3884 53.04 +2 4749939..4751186 + 415 157963714 - Spea_3903 - 3-oxoacyl-(acyl carrier protein) synthase II 3885 46.48 0 4751801..4752127 + 108 157963715 - Spea_3904 - rhodanese domain-containing protein 3886 45.78 0 4752145..4752594 - 149 157963716 - Spea_3905 - thioesterase domain-containing protein 3887 47.03 0 4752644..4753081 - 145 157963717 - Spea_3906 - D-tyrosyl-tRNA(Tyr) deacylase 3888 43.99 0 4753426..4754007 - 193 157963718 - Spea_3907 - hypothetical protein 3889 46.62 0 4754027..4754959 - 310 157963719 - Spea_3908 - prolyl aminopeptidase 3890 46.33 0 4754959..4755981 - 340 157963720 - Spea_3909 - ribonuclease BN 3891 45.61 0 4756115..4756342 + 75 157963721 - Spea_3910 - hypothetical protein 3892 45.52 0 4756373..4757020 + 215 157963722 - Spea_3911 - hypothetical protein 3893 50.12 +1 4757204..4758418 + 404 157963723 - Spea_3912 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3894 47.57 0 4758754..4759617 - 287 157963724 - Spea_3913 - pyridoxal kinase 3895 44.19 0 4759907..4761361 - 484 157963725 - Spea_3914 - disulphide bond formation protein DsbB 3896 45.79 0 4762221..4764050 - 609 157963726 - Spea_3915 - GTP-binding protein TypA 3897 45.46 0 4764725..4766134 + 469 157963727 - Spea_3916 - glutamine synthetase 3898 46.00 0 4766310..4767572 + 420 157963728 - Spea_3917 - sodium:dicarboxylate symporter 3899 40.49 -1 4767795..4768199 + 134 157963729 - Spea_3918 - hypothetical protein 3900 46.03 0 4768245..4768559 + 104 157963730 - Spea_3919 - XRE family transcriptional regulator 3901 47.87 0 4768626..4769636 - 336 157963731 - Spea_3920 - BNR repeat-containing glycosyl hydrolase 3902 40.85 -1 4769883..4770188 + 101 157963732 - Spea_3921 - hypothetical protein 3903 49.10 +1 4770233..4771348 - 371 157963733 - Spea_3922 - aminotransferase class V 3904 49.36 +1 4771353..4772525 - 390 157963734 - Spea_3923 - hypothetical protein 3905 47.46 0 4772696..4773148 + 150 157963735 - Spea_3924 - AsnC family transcriptional regulator 3906 47.93 0 4773308..4774465 + 385 157963736 - Spea_3925 - iron-containing alcohol dehydrogenase 3907 48.82 +1 4774570..4775247 + 225 157963737 - Spea_3926 - ThiJ/PfpI domain-containing protein 3908 45.58 0 4775404..4776048 - 214 157963738 - Spea_3927 - hypothetical protein 3909 45.97 0 4776409..4776954 + 181 157963739 - Spea_3928 - hypothetical protein 3910 49.28 +1 4777107..4778147 + 346 157963740 - Spea_3929 - signal transduction histidine kinase, nitrogen specific, NtrB 3911 52.27 +2 4778165..4779574 + 469 157963741 - Spea_3930 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 3912 49.66 +1 4779643..4780512 - 289 157963742 - Spea_3931 - cation diffusion facilitator family transporter 3913 44.72 0 4780672..4781154 - 160 157963743 - Spea_3932 - protein of unknown function Spy-related 3914 48.39 0 4781386..4782069 + 227 157963744 - Spea_3933 - two component transcriptional regulator 3915 48.58 +1 4782070..4783446 + 458 157963745 - Spea_3934 - histidine kinase 3916 52.78 +2 4783462..4784109 - 215 157963746 - Spea_3935 - regulatory protein TetR 3917 47.30 0 4784231..4785118 + 295 157963747 - Spea_3936 - LysR family transcriptional regulator 3918 43.21 0 4785588..4786832 - 414 157963748 - Spea_3937 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0