IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3819	 51.59	+1	4664896..4666089	+	397	157963649	-	Spea_3838	-	phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
3820	 48.37	0	4666089..4666547	+	152	157963650	-	Spea_3839	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
3821	 46.80	0	4666647..4667240	+	197	157963651	-	Spea_3840	-	nucleoid occlusion protein
3822	 44.38	0	4667377..4669341	+	654	157963652	-	Spea_3841	-	peptidase S9 prolyl oligopeptidase
3823	 48.64	+1	4669611..4670270	+	219	157963653	-	Spea_3842	-	GTP cyclohydrolase I
3824	 47.51	0	4670794..4671435	-	213	157963654	-	Spea_3843	-	orotate phosphoribosyltransferase
3825	 48.04	0	4671555..4672268	-	237	157963655	-	Spea_3844	-	ribonuclease PH
3826	 48.96	+1	4672541..4673404	+	287	157963656	-	Spea_3845	-	hypothetical protein
3827	 42.95	0	4673505..4674824	-	439	157963657	-	Spea_3846	-	HipA domain-containing protein
3828	 45.04	0	4674824..4675105	-	93	157963658	-	Spea_3847	-	helix-turn-helix domain-containing protein
3829	 49.24	+1	4675467..4675730	+	87