IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3794	 49.17	+1	4636211..4637530	-	439	157963624	-	Spea_3813	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase
3795	 47.00	0	4637581..4638663	-	360	157963625	-	Spea_3814	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
3796	 47.75	0	4638663..4640042	-	459	157963626	-	Spea_3815	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
3797	 49.49	+1	4640039..4641505	-	488	157963627	-	Spea_3816	-	UDP-N-acetylmuramyl-tripeptide synthetase
3798	 47.21	0	4641505..4643241	-	578	157963628	-	Spea_3817	-	peptidoglycan glycosyltransferase
3799	 45.08	0	4643238..4643552	-	104	157963629	-	Spea_3818	-	cell division protein FtsL
3800	 49.05	+1	4643569..4644516	-	315	157963630	-	Spea_3819	-	S-adenosyl-methyltransferase MraW
3801	 47.28	0	4644547..4645005	-	152	157963631	-	Spea_3820	-	cell division protein MraZ
3802	 44.64	0	4645522..4645866	+	114	157963632	-	Spea_3821	-	hypothetical protein
3803	 49.06	+1	4645886..4647367	-	493	157963633	-	Spea_3822	-	glycerol kinase
3804	 44.01	0	4647380..4647913	-	177