IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3784	 44.86	0	4623827..4626550	-	907	157963614	-	Spea_3803	-	preprotein translocase subunit SecA
3785	 44.89	0	4626611..4627510	-	299	157963615	-	Spea_3804	-	peptidase M23B
3786	 43.93	0	4627538..4627990	+	150	157963616	-	Spea_3805	-	hypothetical protein
3787	 43.76	0	4627998..4628918	-	306	157963617	-	Spea_3806	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
3788	 47.81	0	4629096..4630283	-	395	157963618	-	Spea_3807	-	cell division protein FtsZ
3789	 48.54	+1	4630315..4631550	-	411	157963619	-	Spea_3808	-	cell division protein FtsA
3790	 45.88	0	4631554..4632342	-	262	157963620	-	Spea_3809	-	polypeptide-transport-associated domain-containing protein
3791	 48.78	+1	4632424..4633893	-	489	157963621	-	Spea_3810	-	UDP-N-acetylmuramate--alanine ligase
3792	 48.63	+1	4633895..4634992	-	365	157963622	-	Spea_3811	-	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
3793	 47.54	0	4635004..4636221	-	405	157963623	-	Spea_3812	-	cell division protein FtsW
3794	 49.17	+1	4636211..4637530	-	439