version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 335 44.53 0 378856..380070 + 404 157960165 - Spea_0336 - hypothetical protein 336 46.72 0 380368..381921 + 517 157960166 - Spea_0337 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 337 46.22 0 382112..383764 - 550 157960167 - Spea_0338 - phenylalanine/histidine ammonia-lyase 338 46.72 0 383792..384142 - 116 157960168 - Spea_0339 - cytochrome c 339 47.77 0 384142..385644 - 500 157960169 - Spea_0340 - flavocytochrome c 340 38.16 -2 385905..386753 + 282 157960170 - Spea_0341 - LysR family transcriptional regulator 341 47.02 0 387020..388027 + 335 157960171 - Spea_0342 - LysR family transcriptional regulator 342 51.20 +1 388225..389097 - 290 157960172 - Spea_0343 - DNA-binding transcriptional regulator IlvY 343 48.72 +1 389278..390759 + 493 157960173 - Spea_0344 - ketol-acid reductoisomerase 344 51.11 +1 391294..393003 + 569 157960174 - Spea_0345 - acetolactate synthase 2 catalytic subunit 345 44.57 0 393081..393347 + 88 157960175 - Spea_0346 - amino acid-binding ACT domain-containing protein 346 49.46 +1 393352..394281 + 309 157960176 - Spea_0347 - branched-chain amino acid aminotransferase 347 51.89 +2 394506..396353 + 615 157960177 - Spea_0348 - dihydroxy-acid dehydratase 348 49.97 +1 396382..397932 + 516 157960178 - Spea_0349 - threonine dehydratase 349 50.84 +1 398269..399405 + 378 157960179 - Spea_0350 - Serine--pyruvate transaminase 350 51.16 +1 399637..401622 - 661 157960180 - Spea_0351 - TonB-dependent copper receptor 351 48.15 0 401814..403190 - 458 157960181 - Spea_0352 - sodium:neurotransmitter symporter 352 47.03 0 403619..404107 - 162 157960182 - Spea_0353 - AsnC family transcriptional regulator 353 49.54 +1 404214..404966 - 250 157960183 - Spea_0354 - phosphoesterase PA-phosphatase related 354 44.52 0 405421..406278 + 285 157960184 - Spea_0355 - hypothetical protein 355 43.14 0 406354..406608 - 84 157960185 - Spea_0356 - hypothetical protein 356 47.82 0 406800..409892 - 1030 157960186 - Spea_0357 - acriflavin resistance protein 357 45.84 0 409908..411026 - 372 157960187 - Spea_0358 - RND family efflux transporter MFP subunit 358 44.12 0 411042..411653 - 203 157960188 - Spea_0359 - TetR family transcriptional regulator 359 46.97 0 411859..413874 + 671 157960189 - Spea_0360 - ATP-dependent DNA helicase Rep 360 42.75 0 413908..416529 - 873 157960190 - Spea_0361 - diguanylate cyclase/phosphodiesterase with GAF sensor 361 45.10 0 417531..419450 - 639 157960191 - Spea_0362 - diguanylate cyclase/phosphodiesterase 362 40.25 -1 419458..420165 - 235 157960192 - Spea_0363 - hypothetical protein 363 44.88 0 420184..420789 - 201 157960193 - Spea_0364 - OmpA/MotB domain-containing protein 364 47.62 0 420786..422213 - 475 157960194 - Spea_0365 - TolC family type I secretion outer membrane protein 365 46.20 0 422248..423630 - 460 157960195 - Spea_0366 - HlyD family type I secretion membrane fusion protein 366 47.98 0 423627..425804 - 725 157960196 - Spea_0367 - ABC transporter related 367 45.87 0 425898..442232 - 5444 157960197 - Spea_0368 - cadherin 368 46.13 0 442471..448674 - 2067 157960198 - Spea_0369 - putative outer membrane adhesin like proteiin 369 45.04 0 448956..450125 - 389 157960199 - Spea_0370 - HemY domain-containing protein 370 45.64 0 450125..451318 - 397 157960200 - Spea_0371 - protein of unknown function DUF513 hemX 371 46.58 0 451380..452111 - 243 157960201 - Spea_0372 - uroporphyrinogen III synthase HEM4 372 48.34 0 452118..453050 - 310 157960202 - Spea_0373 - porphobilinogen deaminase 373 46.66 0 453249..455672 + 807 157960203 - Spea_0374 - adenylate cyclase 374 39.09 -1 455758..456087 - 109 157960204 - Spea_0375 - frataxin family protein 375 45.27 0 456462..456662 + 66 157960205 - Spea_0376 - hypothetical protein 376 49.64 +1 456668..457912 + 414 157960206 - Spea_0377 - diaminopimelate decarboxylase 377 49.82 +1 457970..458806 + 278 157960207 - Spea_0378 - diaminopimelate epimerase 378 46.29 0 458803..459435 + 210 157960208 - Spea_0379 - hypothetical protein 379 48.09 0 459448..460362 + 304 157960209 - Spea_0380 - tyrosine recombinase XerC 380 45.33 0 460359..461075 + 238 157960210 - Spea_0381 - HAD family hydrolase 381 41.08 -1 461183..461647 + 154 157960211 - Spea_0382 - Egg lysin (Sperm-lysin) 382 46.47 0 461706..462428 - 240 157960212 - Spea_0383 - hypothetical protein 383 45.41 0 462769..463182 + 137 157960213 - Spea_0384 - hypothetical protein 384 48.63 +1 463306..464730 + 474 157960214 - Spea_0385 - outer membrane efflux protein 385 49.88 +1 464727..465953 + 408 157960215 - Spea_0386 - hypothetical protein 386 48.83 +1 465965..469120 + 1051 157960216 - Spea_0387 - CzcA family heavy metal efflux protein 387 48.08 0 469272..470804 - 510 157960217 - Spea_0388 - leucyl aminopeptidase 388 44.77 0 471188..471493 - 101 157960218 - Spea_0389 - Fis family transcriptional regulator 389 46.85 0 471511..472479 - 322 157960219 - Spea_0390 - nifR3 family TIM-barrel protein 390 47.17 0 472631..473512 - 293 157960220 - Spea_0391 - ribosomal protein L11 methyltransferase 391 45.39 0 473880..474584 + 234 157960221 - Spea_0392 - fumarate reductase cytochrome b-556 subunit 392 47.41 0 474746..475420 + 224 157960222 - Spea_0393 - fumarate reductase respiratory complex transmembrane subunit 393 48.93 +1 475477..477477 + 666 157960223 - Spea_0394 - fumarate reductase flavoprotein subunit 394 46.91 0 477474..478217 + 247 157960224 - Spea_0395 - fumarate reductase iron-sulfur subunit 395 48.63 +1 478350..479264 + 304 157960225 - Spea_0396 - LysR family transcriptional regulator 396 43.84 0 479324..480589 - 421 157960226 - Spea_0397 - transcription termination factor Rho 397 43.43 0 480827..481153 - 108 157960227 - Spea_0398 - thioredoxin 398 44.70 0 481557..482867 + 436 157960228 - Spea_0399 - ATP-dependent RNA helicase RhlB 399 43.42 0 482881..483792 + 303 157960229 - Spea_0400 - Ppx/GppA phosphatase 400 42.32 0 484439..487420 + 993 157960230 - Spea_0401 - TonB-dependent receptor 401 41.60 -1 487518..487916 + 132 157960231 - Spea_0402 - transposase 402 39.71 -1 488000..488752 + 250 157960232 - Spea_0403 - integrase catalytic region 403 43.11 0 489235..491925 + 896 157960233 - Spea_0404 - TonB-dependent receptor 404 39.14 -1 492003..492536 - 177 157960234 - Spea_0405 - hypothetical protein 405 42.08 0 499518..500534 - 338 157960235 - Spea_0406 - transposase IS116/IS110/IS902 family protein 406 42.31 0 500954..501343 - 129 157960236 - Spea_0407 - mutator MutT protein 407 41.25 -1 501340..501579 - 79 157960237 - Spea_0408 - hypothetical protein 408 43.13 0 501639..502373 - 244 157960238 - Spea_0409 - hypothetical protein 409 41.09 -1 502382..502987 - 201 157960239 - Spea_0410 - dephospho-CoA kinase 410 45.61 0 503007..503918 - 303 157960240 - Spea_0411 - prepilin peptidase 411 46.41 0 503951..505219 - 422 157960241 - Spea_0412 - type II secretion system protein 412 47.22 0 505266..506972 - 568 157960242 - Spea_0413 - type IV-A pilus assembly ATPase PilB 413 42.51 0 507007..507453 - 148 157960243 - Spea_0414 - methylation site containing protein 414 46.33 0 508211..509095 - 294 157960244 - Spea_0415 - nicotinate-nucleotide pyrophosphorylase 415 46.59 0 509338..509880 + 180 157960245 - Spea_0416 - N-acetyl-anhydromuranmyl-L-alanine amidase 416 43.58 0 509947..510795 + 282 157960246 - Spea_0417 - regulatory protein AmpE 417 45.68 0 511158..511910 + 250 157960247 - Spea_0418 - transcriptional regulator PdhR 418 44.87 0 512019..514679 + 886 157960248 - Spea_0419 - pyruvate dehydrogenase subunit E1 419 46.65 0 514693..516555 + 620 157960249 - Spea_0420 - dihydrolipoamide acetyltransferase 420 45.31 0 516799..518226 + 475 157960250 - Spea_0421 - dihydrolipoamide dehydrogenase 421 44.45 0 518372..522850 + 1492 157960251 - Spea_0422 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 422 45.69 0 522943..525159 + 738 157960252 - Spea_0423 - patatin 423 43.50 0 525248..525916 - 222 157960253 - Spea_0424 - 2-deoxyglucose-6-phosphatase 424 47.38 0 526341..528938 + 865 157960254 - Spea_0425 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 425 42.74 0 529135..529602 - 155 157960255 - Spea_0426 - anti-RNA polymerase sigma 70 factor 426 45.54 0 530134..531198 + 354 157960256 - Spea_0427 - uroporphyrinogen decarboxylase 427 44.56 0 531806..534379 + 857 157960257 - Spea_0428 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 428 47.51 0 534487..535290 + 267 157960258 - Spea_0429 - short chain dehydrogenase 429 45.66 0 535323..535541 - 72 157960259 - Spea_0430 - hypothetical protein 430 48.85 +1 536172..537473 - 433 157960260 - Spea_0431 - phosphoribosylamine--glycine ligase 431 48.36 0 537651..539240 - 529 157960261 - Spea_0432 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 432 45.98 0 539597..540118 + 173 157960262 - Spea_0433 - zinc-responsive transcriptional regulator 433 48.99 +1 540140..541525 + 461 157960263 - Spea_0434 - permease 434 46.58 0 541687..542343 + 218 157960264 - Spea_0435 - DSBA oxidoreductase 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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